Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AL163195.1-201ENST00000496941 348 ntBASIC0.95□□□□□ -2.26
CD40LGP29965 AC079140.3-201ENST00000511111 550 ntBASIC0.95□□□□□ -2.26
CD40LGP29965 MIR449C-201ENST00000516047 92 ntBASIC0.95□□□□□ -2.26
CD40LGP29965 RNU5A-4P-201ENST00000516588 111 ntBASIC0.95□□□□□ -2.26
CD40LGP29965 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.95□□□□□ -2.26
CD40LGP29965 AC080013.3-201ENST00000606839 578 ntBASIC0.95□□□□□ -2.26
CD40LGP29965 AC004492.1-201ENST00000607036 742 ntBASIC0.95□□□□□ -2.26
CD40LGP29965 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.95□□□□□ -2.26
CD40LGP29965 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.95□□□□□ -2.26
CD40LGP29965 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.94□□□□□ -2.26
CD40LGP29965 MIR337-201ENST00000362281 93 ntBASIC0.94□□□□□ -2.26
CD40LGP29965 Y_RNA.327-201ENST00000365201 102 ntBASIC0.94□□□□□ -2.26
CD40LGP29965 Y_RNA.338-201ENST00000365320 114 ntBASIC0.94□□□□□ -2.26
CD40LGP29965 RAP1BP3-201ENST00000407180 549 ntBASIC0.94□□□□□ -2.26
CD40LGP29965 Y_RNA.595-201ENST00000410403 105 ntBASIC0.94□□□□□ -2.26
CD40LGP29965 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.94□□□□□ -2.26
CD40LGP29965 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.94□□□□□ -2.26
CD40LGP29965 SNX2P2-201ENST00000424553 323 ntBASIC0.94□□□□□ -2.26
CD40LGP29965 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.94□□□□□ -2.26
CD40LGP29965 RPS6P15-201ENST00000431996 751 ntBASIC0.94□□□□□ -2.26
CD40LGP29965 AC245047.4-201ENST00000433189 144 ntBASIC0.94□□□□□ -2.26
CD40LGP29965 AC087343.1-201ENST00000477341 475 ntBASIC0.94□□□□□ -2.26
CD40LGP29965 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.94□□□□□ -2.26
CD40LGP29965 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.94□□□□□ -2.26
CD40LGP29965 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.94□□□□□ -2.26
CD40LGP29965 MTCO3P9-201ENST00000506989 781 ntBASIC0.94□□□□□ -2.26
CD40LGP29965 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.94□□□□□ -2.26
CD40LGP29965 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.94□□□□□ -2.26
CD40LGP29965 AC107934.1-201ENST00000522215 217 ntBASIC0.94□□□□□ -2.26
CD40LGP29965 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.94□□□□□ -2.26
CD40LGP29965 MIR4307-201ENST00000582802 84 ntBASIC0.94□□□□□ -2.26
CD40LGP29965 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.94□□□□□ -2.26
CD40LGP29965 MZT1P2-201ENST00000604387 248 ntBASIC0.94□□□□□ -2.26
CD40LGP29965 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.94□□□□□ -2.26
CD40LGP29965 AC092140.2-201ENST00000618027 521 ntBASIC0.94□□□□□ -2.26
CD40LGP29965 AC027335.2-201ENST00000624030 375 ntBASIC0.94□□□□□ -2.26
CD40LGP29965 OR4G3P-201ENST00000633500 913 ntBASIC0.94□□□□□ -2.26
CD40LGP29965 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.94□□□□□ -2.26
CD40LGP29965 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
CD40LGP29965 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.94□□□□□ -2.26
CD40LGP29965 RNU4-15P-201ENST00000362613 141 ntBASIC0.93□□□□□ -2.26
CD40LGP29965 SNORA63D-201ENST00000364359 132 ntBASIC0.93□□□□□ -2.26
CD40LGP29965 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
CD40LGP29965 RNU6-1179P-201ENST00000384667 107 ntBASIC0.93□□□□□ -2.26
CD40LGP29965 MIR194-1-201ENST00000384892 85 ntBASIC0.93□□□□□ -2.26
CD40LGP29965 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.93□□□□□ -2.26
CD40LGP29965 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.93□□□□□ -2.26
CD40LGP29965 AC132479.1-201ENST00000449160 144 ntBASIC0.93□□□□□ -2.26
CD40LGP29965 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.93□□□□□ -2.26
CD40LGP29965 MIR3124-201ENST00000582636 67 ntBASIC0.93□□□□□ -2.26
CD40LGP29965 AL592221.1-201ENST00000605266 382 ntBASIC0.93□□□□□ -2.26
CD40LGP29965 AL158032.1-201ENST00000605401 106 ntBASIC0.93□□□□□ -2.26
CD40LGP29965 AC016727.1-205ENST00000605437 569 ntBASIC0.93□□□□□ -2.26
CD40LGP29965 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.93□□□□□ -2.26
CD40LGP29965 AP002782.1-201ENST00000623107 614 ntBASIC0.93□□□□□ -2.26
CD40LGP29965 AC091895.1-201ENST00000624494 256 ntBASIC0.93□□□□□ -2.26
CD40LGP29965 RNU6-1019P-201ENST00000364424 107 ntBASIC0.92□□□□□ -2.26
CD40LGP29965 SNORA25-201ENST00000384384 134 ntBASIC0.92□□□□□ -2.26
CD40LGP29965 MIR578-201ENST00000384828 96 ntBASIC0.92□□□□□ -2.26
CD40LGP29965 RNU6-1176P-201ENST00000390955 107 ntBASIC0.92□□□□□ -2.26
CD40LGP29965 RPS20P2-201ENST00000402520 389 ntBASIC0.92□□□□□ -2.26
CD40LGP29965 MTCO3P41-201ENST00000414801 328 ntBASIC0.92□□□□□ -2.26
CD40LGP29965 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.92□□□□□ -2.26
CD40LGP29965 AC099677.2-201ENST00000436385 175 ntBASIC0.92□□□□□ -2.26
CD40LGP29965 MTND3P1-201ENST00000441336 220 ntBASIC0.92□□□□□ -2.26
CD40LGP29965 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.92□□□□□ -2.26
CD40LGP29965 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
CD40LGP29965 AC022447.4-201ENST00000504053 364 ntBASIC0.92□□□□□ -2.26
CD40LGP29965 AC011979.2-201ENST00000527568 352 ntBASIC0.92□□□□□ -2.26
CD40LGP29965 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.92□□□□□ -2.26
CD40LGP29965 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.92□□□□□ -2.26
CD40LGP29965 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.92□□□□□ -2.26
CD40LGP29965 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.92□□□□□ -2.26
CD40LGP29965 MTND4P16-201ENST00000466108 1367 ntBASIC0.92□□□□□ -2.26
CD40LGP29965 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.91□□□□□ -2.26
CD40LGP29965 RNU6-1285P-201ENST00000363480 105 ntBASIC0.91□□□□□ -2.26
CD40LGP29965 SNORA12-201ENST00000391162 147 ntBASIC0.91□□□□□ -2.26
CD40LGP29965 AL031779.1-201ENST00000415663 330 ntBASIC0.91□□□□□ -2.26
CD40LGP29965 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.91□□□□□ -2.26
CD40LGP29965 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.91□□□□□ -2.26
CD40LGP29965 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.91□□□□□ -2.26
CD40LGP29965 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.91□□□□□ -2.26
CD40LGP29965 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.91□□□□□ -2.26
CD40LGP29965 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.91□□□□□ -2.26
CD40LGP29965 AL590229.1-201ENST00000603497 542 ntBASIC0.91□□□□□ -2.26
CD40LGP29965 AL391646.1-201ENST00000603860 190 ntBASIC0.91□□□□□ -2.26
CD40LGP29965 AL034555.1-201ENST00000604816 211 ntBASIC0.91□□□□□ -2.26
CD40LGP29965 BX284668.6-201ENST00000606899 438 ntBASIC0.91□□□□□ -2.26
CD40LGP29965 RNU6-87P-201ENST00000607561 108 ntBASIC0.91□□□□□ -2.26
CD40LGP29965 AC026585.1-201ENST00000619582 524 ntBASIC0.91□□□□□ -2.26
CD40LGP29965 AL138955.1-201ENST00000622881 1040 ntBASIC0.91□□□□□ -2.26
CD40LGP29965 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.91□□□□□ -2.26
CD40LGP29965 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.91□□□□□ -2.26
CD40LGP29965 AL445523.1-201ENST00000451184 1362 ntBASIC0.91□□□□□ -2.26
CD40LGP29965 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.91□□□□□ -2.26
CD40LGP29965 RNU6-78P-201ENST00000362897 107 ntBASIC0.9□□□□□ -2.27
CD40LGP29965 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
CD40LGP29965 RNU6-1000P-201ENST00000391066 106 ntBASIC0.9□□□□□ -2.27
CD40LGP29965 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.9□□□□□ -2.27
CD40LGP29965 AC019070.1-201ENST00000415008 1024 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms