Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.11□□□□□ -2.07
PTPN4P29074 AL670379.2-201ENST00000604983 252 ntBASIC2.11□□□□□ -2.07
PTPN4P29074 SDR42E1P4-201ENST00000620894 481 ntBASIC2.11□□□□□ -2.07
PTPN4P29074 RMST_7.1-201ENST00000621935 268 ntBASIC2.11□□□□□ -2.07
PTPN4P29074 AL031601.2-202ENST00000622650 282 ntBASIC2.11□□□□□ -2.07
PTPN4P29074 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.11□□□□□ -2.07
PTPN4P29074 AC099654.12-201ENST00000639868 649 ntBASIC2.11□□□□□ -2.07
PTPN4P29074 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
PTPN4P29074 AC008555.8-201ENST00000623602 2168 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.1□□□□□ -2.07
PTPN4P29074 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.1□□□□□ -2.07
PTPN4P29074 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PTPN4P29074 RNU6-655P-201ENST00000362858 107 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 RNU6-1322P-201ENST00000364309 107 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 RNU6-393P-201ENST00000384475 107 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 SNORD70.1-201ENST00000391007 85 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 AL079342.1-201ENST00000401460 267 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 AL133475.1-201ENST00000404414 305 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 MIR1289-2-201ENST00000408360 111 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 AL591043.1-201ENST00000432461 424 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 HMGN2P3-201ENST00000433603 273 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 HMGN2P5-201ENST00000436882 273 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 HMGB1P31-201ENST00000437242 427 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 RPL7P54-201ENST00000438336 674 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.1□□□□□ -2.07
PTPN4P29074 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.1□□□□□ -2.07
PTPN4P29074 snoU13.23-201ENST00000458863 104 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 snoU13.14-201ENST00000459372 104 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 SRRM1P2-201ENST00000464531 1192 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 AC055731.1-201ENST00000474387 401 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 AC091435.1-201ENST00000505442 584 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.1□□□□□ -2.07
PTPN4P29074 Y_RNA.655-201ENST00000515919 96 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 RNU2-69P-201ENST00000516061 100 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 MIR514B-201ENST00000516774 80 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.1□□□□□ -2.07
PTPN4P29074 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.1□□□□□ -2.07
PTPN4P29074 AL137161.1-201ENST00000532231 390 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 AC022880.1-201ENST00000534017 973 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 MTCO3P23-201ENST00000561363 289 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.1□□□□□ -2.07
PTPN4P29074 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.1□□□□□ -2.07
PTPN4P29074 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.1□□□□□ -2.07
PTPN4P29074 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.1□□□□□ -2.07
PTPN4P29074 EIF1P4-201ENST00000572664 335 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 AC026271.5-201ENST00000577873 130 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 MIR4287-201ENST00000579398 78 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 RPL30P11-203ENST00000598995 310 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 uc_338.20-201ENST00000621563 178 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 DUXAP9-208ENST00000622815 614 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 AC022418.1-201ENST00000624118 445 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 AC068137.4-201ENST00000638485 296 ntBASIC2.1□□□□□ -2.07
PTPN4P29074 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.1□□□□□ -2.07
PTPN4P29074 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PTPN4P29074 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
PTPN4P29074 RNU6-1085P-201ENST00000363576 107 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 RNU6-1210P-201ENST00000363775 107 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 Y_RNA.481-201ENST00000384373 102 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 SNORA64-201ENST00000384674 134 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 U3.40-201ENST00000408706 208 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 SNORA11.4-201ENST00000408823 129 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 RN7SKP32-201ENST00000410167 303 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.09□□□□□ -2.07
PTPN4P29074 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.09□□□□□ -2.07
PTPN4P29074 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.09□□□□□ -2.07
PTPN4P29074 RNA5SP233-201ENST00000459153 113 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 RPL21P99-201ENST00000480369 423 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.09□□□□□ -2.07
PTPN4P29074 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.09□□□□□ -2.07
PTPN4P29074 AC019235.1-201ENST00000503847 207 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.09□□□□□ -2.07
PTPN4P29074 AC009646.1-201ENST00000510455 318 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 RNU2-53P-201ENST00000516257 147 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 RNU6-720P-201ENST00000516363 108 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 Y_RNA.693-201ENST00000516641 110 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 SNORA31.23-201ENST00000517219 133 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 OR11H5P-201ENST00000554039 926 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 DEFB122-202ENST00000569013 197 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 MIR4769-201ENST00000584126 77 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 MIR4424-201ENST00000585257 86 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 AL713866.2-201ENST00000603579 219 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 AC009314.1-201ENST00000603871 304 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 AC092954.2-201ENST00000609103 430 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 Z82243.1-201ENST00000609432 473 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 MIR6132-201ENST00000622083 109 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 Z69720.2-201ENST00000624755 279 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 MIR219B-201ENST00000637023 88 ntBASIC2.09□□□□□ -2.07
PTPN4P29074 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.09□□□□□ -2.07
PTPN4P29074 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
PTPN4P29074 AC092881.1-201ENST00000638218 2733 ntBASIC2.09□□□□□ -2.08
PTPN4P29074 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
PTPN4P29074 Y_RNA.399-201ENST00000383955 105 ntBASIC2.08□□□□□ -2.08
PTPN4P29074 RNU6-780P-201ENST00000391030 104 ntBASIC2.08□□□□□ -2.08
PTPN4P29074 SUMO2P12-201ENST00000405924 140 ntBASIC2.08□□□□□ -2.08
PTPN4P29074 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PTPN4P29074 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.08□□□□□ -2.08
PTPN4P29074 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PTPN4P29074 TIMM9P3-201ENST00000428659 274 ntBASIC2.08□□□□□ -2.08
PTPN4P29074 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms