Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RNU6-394P-201ENST00000410735 107 ntBASIC4.45□□□□□ -1.7
RXRBP28702 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.45□□□□□ -1.7
RXRBP28702 TOMM20P4-201ENST00000427861 435 ntBASIC4.45□□□□□ -1.7
RXRBP28702 AC108938.1-201ENST00000451204 136 ntBASIC4.45□□□□□ -1.7
RXRBP28702 NDUFB4P10-201ENST00000452541 359 ntBASIC4.45□□□□□ -1.7
RXRBP28702 RNU7-87P-201ENST00000459343 62 ntBASIC4.45□□□□□ -1.7
RXRBP28702 MIR2355-201ENST00000517199 87 ntBASIC4.45□□□□□ -1.7
RXRBP28702 AC109479.2-201ENST00000517842 174 ntBASIC4.45□□□□□ -1.7
RXRBP28702 MIR4659A-201ENST00000580269 81 ntBASIC4.45□□□□□ -1.7
RXRBP28702 RPL23AP78-201ENST00000599928 470 ntBASIC4.45□□□□□ -1.7
RXRBP28702 AC005046.1-201ENST00000608515 625 ntBASIC4.45□□□□□ -1.7
RXRBP28702 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC4.45□□□□□ -1.7
RXRBP28702 U6.106-201ENST00000636360 105 ntBASIC4.45□□□□□ -1.7
RXRBP28702 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.45□□□□□ -1.7
RXRBP28702 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.45□□□□□ -1.7
RXRBP28702 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.44□□□□□ -1.7
RXRBP28702 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.44□□□□□ -1.7
RXRBP28702 SNORD63-201ENST00000384262 68 ntBASIC4.44□□□□□ -1.7
RXRBP28702 AL513331.1-201ENST00000411908 397 ntBASIC4.44□□□□□ -1.7
RXRBP28702 AL358453.1-201ENST00000422522 250 ntBASIC4.44□□□□□ -1.7
RXRBP28702 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.44□□□□□ -1.7
RXRBP28702 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.44□□□□□ -1.7
RXRBP28702 RPS29P31-201ENST00000446147 164 ntBASIC4.44□□□□□ -1.7
RXRBP28702 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.44□□□□□ -1.7
RXRBP28702 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.44□□□□□ -1.7
RXRBP28702 AC091021.1-201ENST00000468051 388 ntBASIC4.44□□□□□ -1.7
RXRBP28702 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.44□□□□□ -1.7
RXRBP28702 RNA5SP367-201ENST00000516557 118 ntBASIC4.44□□□□□ -1.7
RXRBP28702 HIGD1AP1-201ENST00000550979 275 ntBASIC4.44□□□□□ -1.7
RXRBP28702 MIR3144-201ENST00000579460 79 ntBASIC4.44□□□□□ -1.7
RXRBP28702 AL161798.1-201ENST00000604630 131 ntBASIC4.44□□□□□ -1.7
RXRBP28702 MIR7111-201ENST00000619751 72 ntBASIC4.44□□□□□ -1.7
RXRBP28702 AC090617.7-201ENST00000623952 126 ntBASIC4.44□□□□□ -1.7
RXRBP28702 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.44□□□□□ -1.7
RXRBP28702 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
RXRBP28702 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RXRBP28702 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.43□□□□□ -1.7
RXRBP28702 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.43□□□□□ -1.7
RXRBP28702 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RXRBP28702 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RXRBP28702 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RXRBP28702 RNU4-90P-201ENST00000362773 141 ntBASIC4.43□□□□□ -1.7
RXRBP28702 RNU6-428P-201ENST00000362942 107 ntBASIC4.43□□□□□ -1.7
RXRBP28702 RNU6-1020P-201ENST00000363684 107 ntBASIC4.43□□□□□ -1.7
RXRBP28702 Y_RNA.240-201ENST00000364469 95 ntBASIC4.43□□□□□ -1.7
RXRBP28702 Y_RNA.286-201ENST00000364813 102 ntBASIC4.43□□□□□ -1.7
RXRBP28702 RNU6-1027P-201ENST00000383998 107 ntBASIC4.43□□□□□ -1.7
RXRBP28702 MIR301A-201ENST00000385261 86 ntBASIC4.43□□□□□ -1.7
RXRBP28702 RNU6-918P-201ENST00000391219 106 ntBASIC4.43□□□□□ -1.7
RXRBP28702 RNU6-1025P-201ENST00000410629 104 ntBASIC4.43□□□□□ -1.7
RXRBP28702 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.43□□□□□ -1.7
RXRBP28702 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.43□□□□□ -1.7
RXRBP28702 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.43□□□□□ -1.7
RXRBP28702 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.43□□□□□ -1.7
RXRBP28702 CASP1P1-201ENST00000526345 212 ntBASIC4.43□□□□□ -1.7
RXRBP28702 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.43□□□□□ -1.7
RXRBP28702 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RXRBP28702 MIR4282-201ENST00000583613 67 ntBASIC4.43□□□□□ -1.7
RXRBP28702 AL161629.2-201ENST00000615347 275 ntBASIC4.43□□□□□ -1.7
RXRBP28702 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.43□□□□□ -1.7
RXRBP28702 AC097372.5-201ENST00000623665 376 ntBASIC4.43□□□□□ -1.7
RXRBP28702 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.43□□□□□ -1.7
RXRBP28702 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RXRBP28702 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RXRBP28702 MFSD8-233ENST00000641482 4860 ntBASIC4.43□□□□□ -1.7
RXRBP28702 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RXRBP28702 UBE3AP2-201ENST00000429033 2259 ntBASIC4.43□□□□□ -1.7
RXRBP28702 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RXRBP28702 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RXRBP28702 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RXRBP28702 NCAPGP1-201ENST00000505112 1814 ntBASIC4.42□□□□□ -1.7
RXRBP28702 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RXRBP28702 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RXRBP28702 MIR412-201ENST00000362142 91 ntBASIC4.42□□□□□ -1.7
RXRBP28702 Y_RNA.81-201ENST00000362997 102 ntBASIC4.42□□□□□ -1.7
RXRBP28702 SNORD78.2-201ENST00000391076 69 ntBASIC4.42□□□□□ -1.7
RXRBP28702 U3.39-201ENST00000408569 239 ntBASIC4.42□□□□□ -1.7
RXRBP28702 EEF1A1P41-201ENST00000414667 207 ntBASIC4.42□□□□□ -1.7
RXRBP28702 AL353705.1-201ENST00000433468 480 ntBASIC4.42□□□□□ -1.7
RXRBP28702 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.42□□□□□ -1.7
RXRBP28702 Z82188.1-201ENST00000436709 154 ntBASIC4.42□□□□□ -1.7
RXRBP28702 NDUFS5P3-201ENST00000450668 321 ntBASIC4.42□□□□□ -1.7
RXRBP28702 Y_RNA.662-201ENST00000516028 97 ntBASIC4.42□□□□□ -1.7
RXRBP28702 RNU6-579P-201ENST00000516879 102 ntBASIC4.42□□□□□ -1.7
RXRBP28702 MRPS18CP4-201ENST00000535821 231 ntBASIC4.42□□□□□ -1.7
RXRBP28702 AC090617.3-201ENST00000573670 475 ntBASIC4.42□□□□□ -1.7
RXRBP28702 AC060766.3-201ENST00000591442 263 ntBASIC4.42□□□□□ -1.7
RXRBP28702 AC025946.2-201ENST00000603398 234 ntBASIC4.42□□□□□ -1.7
RXRBP28702 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.42□□□□□ -1.7
RXRBP28702 AC006065.5-201ENST00000623427 349 ntBASIC4.42□□□□□ -1.7
RXRBP28702 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RXRBP28702 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
RXRBP28702 FAM35DP-201ENST00000323387 2712 ntBASIC4.42□□□□□ -1.7
RXRBP28702 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.42□□□□□ -1.7
RXRBP28702 AC008725.1-201ENST00000605123 2263 ntBASIC4.42□□□□□ -1.7
RXRBP28702 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
RXRBP28702 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.41□□□□□ -1.7
RXRBP28702 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RXRBP28702 RNU6-1167P-201ENST00000363227 94 ntBASIC4.41□□□□□ -1.7
RXRBP28702 U3.15-201ENST00000365398 212 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms