Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TNFAIP3P21580 AC092268.1-201ENST00000342691 405 ntBASIC2.64□□□□□ -1.99
TNFAIP3P21580 RNU1-23P-201ENST00000363361 144 ntBASIC2.64□□□□□ -1.99
TNFAIP3P21580 RNU6-611P-201ENST00000384276 104 ntBASIC2.64□□□□□ -1.99
TNFAIP3P21580 RNU6-43P-201ENST00000384302 107 ntBASIC2.64□□□□□ -1.99
TNFAIP3P21580 RNA5SP184-201ENST00000411071 108 ntBASIC2.64□□□□□ -1.99
TNFAIP3P21580 AC063976.3-201ENST00000426849 329 ntBASIC2.64□□□□□ -1.99
TNFAIP3P21580 AC244670.1-201ENST00000436879 112 ntBASIC2.64□□□□□ -1.99
TNFAIP3P21580 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.64□□□□□ -1.99
TNFAIP3P21580 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.64□□□□□ -1.99
TNFAIP3P21580 AL353752.1-201ENST00000454946 260 ntBASIC2.64□□□□□ -1.99
TNFAIP3P21580 AC087884.1-201ENST00000469738 328 ntBASIC2.64□□□□□ -1.99
TNFAIP3P21580 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.64□□□□□ -1.99
TNFAIP3P21580 HMGB1P35-201ENST00000503360 598 ntBASIC2.64□□□□□ -1.99
TNFAIP3P21580 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.64□□□□□ -1.99
TNFAIP3P21580 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TNFAIP3P21580 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.64□□□□□ -1.99
TNFAIP3P21580 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.64□□□□□ -1.99
TNFAIP3P21580 AC022616.8-201ENST00000533569 253 ntBASIC2.64□□□□□ -1.99
TNFAIP3P21580 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.64□□□□□ -1.99
TNFAIP3P21580 AL049779.4-201ENST00000604500 156 ntBASIC2.64□□□□□ -1.99
TNFAIP3P21580 YWHAEP7-203ENST00000622054 312 ntBASIC2.64□□□□□ -1.99
TNFAIP3P21580 MIR1321-201ENST00000637766 79 ntBASIC2.64□□□□□ -1.99
TNFAIP3P21580 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
TNFAIP3P21580 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
TNFAIP3P21580 Y_RNA.6-201ENST00000362350 114 ntBASIC2.63□□□□□ -1.99
TNFAIP3P21580 Y_RNA.231-201ENST00000364358 102 ntBASIC2.63□□□□□ -1.99
TNFAIP3P21580 U3.13-201ENST00000364804 214 ntBASIC2.63□□□□□ -1.99
TNFAIP3P21580 RNU6-692P-201ENST00000384496 107 ntBASIC2.63□□□□□ -1.99
TNFAIP3P21580 RNU6-780P-201ENST00000391030 104 ntBASIC2.63□□□□□ -1.99
TNFAIP3P21580 EIF4E2P1-201ENST00000393781 255 ntBASIC2.63□□□□□ -1.99
TNFAIP3P21580 RNU2-32P-201ENST00000411193 191 ntBASIC2.63□□□□□ -1.99
TNFAIP3P21580 HMGB3P2-201ENST00000411913 584 ntBASIC2.63□□□□□ -1.99
TNFAIP3P21580 RPL23AP95-201ENST00000426806 265 ntBASIC2.63□□□□□ -1.99
TNFAIP3P21580 AL133396.1-201ENST00000432048 687 ntBASIC2.63□□□□□ -1.99
TNFAIP3P21580 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.63□□□□□ -1.99
TNFAIP3P21580 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.63□□□□□ -1.99
TNFAIP3P21580 RN7SKP24-201ENST00000515888 284 ntBASIC2.63□□□□□ -1.99
TNFAIP3P21580 AC103996.1-201ENST00000555468 102 ntBASIC2.63□□□□□ -1.99
TNFAIP3P21580 AC092954.2-201ENST00000609103 430 ntBASIC2.63□□□□□ -1.99
TNFAIP3P21580 AC092807.2-201ENST00000609367 243 ntBASIC2.63□□□□□ -1.99
TNFAIP3P21580 FER-210ENST00000628534 558 ntTSL 5 BASIC2.63□□□□□ -1.99
TNFAIP3P21580 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.63□□□□□ -1.99
TNFAIP3P21580 AC069528.2-201ENST00000624849 1991 ntBASIC2.63□□□□□ -1.99
TNFAIP3P21580 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TNFAIP3P21580 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
TNFAIP3P21580 SNORD32A-201ENST00000364805 84 ntBASIC2.62□□□□□ -1.99
TNFAIP3P21580 RNU4-20P-201ENST00000365601 151 ntBASIC2.62□□□□□ -1.99
TNFAIP3P21580 Y_RNA.378-201ENST00000365652 113 ntBASIC2.62□□□□□ -1.99
TNFAIP3P21580 Y_RNA.554-201ENST00000384672 102 ntBASIC2.62□□□□□ -1.99
TNFAIP3P21580 SNORA41-201ENST00000384675 132 ntBASIC2.62□□□□□ -1.99
TNFAIP3P21580 MIR196B-201ENST00000384852 84 ntBASIC2.62□□□□□ -1.99
TNFAIP3P21580 AL590002.1-201ENST00000406554 418 ntBASIC2.62□□□□□ -1.99
TNFAIP3P21580 SNORD23.1-201ENST00000408212 104 ntBASIC2.62□□□□□ -1.99
TNFAIP3P21580 MIR548F1-201ENST00000408667 84 ntBASIC2.62□□□□□ -1.99
TNFAIP3P21580 AP000275.1-201ENST00000411943 390 ntBASIC2.62□□□□□ -1.99
TNFAIP3P21580 FCF1P9-201ENST00000412546 282 ntBASIC2.62□□□□□ -1.99
TNFAIP3P21580 MTND1P4-201ENST00000435196 415 ntBASIC2.62□□□□□ -1.99
TNFAIP3P21580 UBE2DNL-203ENST00000474922 222 ntBASIC2.62□□□□□ -1.99
TNFAIP3P21580 AC016632.1-201ENST00000503994 196 ntBASIC2.62□□□□□ -1.99
TNFAIP3P21580 SNORA19.2-201ENST00000516013 114 ntBASIC2.62□□□□□ -1.99
TNFAIP3P21580 Y_RNA.704-201ENST00000516851 102 ntBASIC2.62□□□□□ -1.99
TNFAIP3P21580 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
TNFAIP3P21580 AP001836.1-201ENST00000604675 523 ntBASIC2.62□□□□□ -1.99
TNFAIP3P21580 AL034555.1-201ENST00000604816 211 ntBASIC2.62□□□□□ -1.99
TNFAIP3P21580 OR4G1P-203ENST00000641984 1631 ntBASIC2.61□□□□□ -1.99
TNFAIP3P21580 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
TNFAIP3P21580 snoU2_19.1-201ENST00000362361 80 ntBASIC2.61□□□□□ -1.99
TNFAIP3P21580 RNU6-483P-201ENST00000384088 108 ntBASIC2.61□□□□□ -1.99
TNFAIP3P21580 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.61□□□□□ -1.99
TNFAIP3P21580 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.61□□□□□ -1.99
TNFAIP3P21580 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.61□□□□□ -1.99
TNFAIP3P21580 ERLEC1P1-201ENST00000433806 578 ntBASIC2.61□□□□□ -1.99
TNFAIP3P21580 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.61□□□□□ -1.99
TNFAIP3P21580 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.61□□□□□ -1.99
TNFAIP3P21580 AC132942.1-201ENST00000486753 483 ntBASIC2.61□□□□□ -1.99
TNFAIP3P21580 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.61□□□□□ -1.99
TNFAIP3P21580 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.61□□□□□ -1.99
TNFAIP3P21580 RNA5SP320-201ENST00000516263 124 ntBASIC2.61□□□□□ -1.99
TNFAIP3P21580 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.61□□□□□ -1.99
TNFAIP3P21580 AC007375.1-201ENST00000554513 578 ntBASIC2.61□□□□□ -1.99
TNFAIP3P21580 AL118558.2-201ENST00000556294 238 ntBASIC2.61□□□□□ -1.99
TNFAIP3P21580 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.61□□□□□ -1.99
TNFAIP3P21580 TPRKBP2-201ENST00000565969 475 ntBASIC2.61□□□□□ -1.99
TNFAIP3P21580 U4.3-201ENST00000621047 82 ntBASIC2.61□□□□□ -1.99
TNFAIP3P21580 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.61□□□□□ -1.99
TNFAIP3P21580 SNORD98-201ENST00000636377 67 ntBASIC2.61□□□□□ -1.99
TNFAIP3P21580 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TNFAIP3P21580 AC131280.1-202ENST00000624067 4211 ntBASIC2.61□□□□□ -1.99
TNFAIP3P21580 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
TNFAIP3P21580 AL136360.1-201ENST00000503377 1900 ntBASIC2.6□□□□□ -1.99
TNFAIP3P21580 MIR21-201ENST00000362134 72 ntBASIC2.6□□□□□ -1.99
TNFAIP3P21580 RNU4-12P-201ENST00000365233 139 ntBASIC2.6□□□□□ -1.99
TNFAIP3P21580 SNORA26.3-201ENST00000391119 136 ntBASIC2.6□□□□□ -1.99
TNFAIP3P21580 RNU6-908P-201ENST00000410160 94 ntBASIC2.6□□□□□ -1.99
TNFAIP3P21580 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.6□□□□□ -1.99
TNFAIP3P21580 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TNFAIP3P21580 AC245102.2-201ENST00000448956 180 ntBASIC2.6□□□□□ -1.99
TNFAIP3P21580 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.6□□□□□ -1.99
TNFAIP3P21580 AC114801.2-201ENST00000503825 781 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms