Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 MIR2116-201ENST00000517221 80 ntBASIC3.34□□□□□ -1.87
KRT4P19013 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.34□□□□□ -1.87
KRT4P19013 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.34□□□□□ -1.87
KRT4P19013 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.34□□□□□ -1.87
KRT4P19013 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
KRT4P19013 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
KRT4P19013 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.88
KRT4P19013 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRT4P19013 AC008568.2-201ENST00000623862 2313 ntBASIC3.33□□□□□ -1.88
KRT4P19013 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRT4P19013 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRT4P19013 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
KRT4P19013 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
KRT4P19013 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRT4P19013 MIR1290-201ENST00000408735 78 ntBASIC3.33□□□□□ -1.88
KRT4P19013 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.33□□□□□ -1.88
KRT4P19013 AL117339.3-201ENST00000418733 162 ntBASIC3.33□□□□□ -1.88
KRT4P19013 RPL21P40-201ENST00000428586 483 ntBASIC3.33□□□□□ -1.88
KRT4P19013 AC013470.1-201ENST00000453438 462 ntBASIC3.33□□□□□ -1.88
KRT4P19013 AL031183.1-201ENST00000457667 207 ntBASIC3.33□□□□□ -1.88
KRT4P19013 SNORD105B-201ENST00000458770 79 ntBASIC3.33□□□□□ -1.88
KRT4P19013 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.33□□□□□ -1.88
KRT4P19013 AL049874.1-201ENST00000489560 388 ntBASIC3.33□□□□□ -1.88
KRT4P19013 SEPT14P8-201ENST00000508026 178 ntBASIC3.33□□□□□ -1.88
KRT4P19013 AC107393.1-201ENST00000512403 346 ntBASIC3.33□□□□□ -1.88
KRT4P19013 RNA5SP217-201ENST00000515959 91 ntBASIC3.33□□□□□ -1.88
KRT4P19013 RN7SKP21-201ENST00000516503 220 ntBASIC3.33□□□□□ -1.88
KRT4P19013 SCARNA24.2-201ENST00000516968 130 ntBASIC3.33□□□□□ -1.88
KRT4P19013 AC109479.2-201ENST00000517842 174 ntBASIC3.33□□□□□ -1.88
KRT4P19013 AC245166.1-201ENST00000521012 253 ntBASIC3.33□□□□□ -1.88
KRT4P19013 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.33□□□□□ -1.88
KRT4P19013 CASP1P1-201ENST00000526345 212 ntBASIC3.33□□□□□ -1.88
KRT4P19013 MRPS36P4-201ENST00000534436 298 ntBASIC3.33□□□□□ -1.88
KRT4P19013 PARP1P2-201ENST00000556806 195 ntBASIC3.33□□□□□ -1.88
KRT4P19013 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.33□□□□□ -1.88
KRT4P19013 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.33□□□□□ -1.88
KRT4P19013 MIR3921-201ENST00000577308 85 ntBASIC3.33□□□□□ -1.88
KRT4P19013 MIR4643-201ENST00000577473 78 ntBASIC3.33□□□□□ -1.88
KRT4P19013 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.33□□□□□ -1.88
KRT4P19013 AL133393.1-201ENST00000603277 287 ntBASIC3.33□□□□□ -1.88
KRT4P19013 Z83818.1-201ENST00000603584 150 ntBASIC3.33□□□□□ -1.88
KRT4P19013 AL590392.1-201ENST00000604960 446 ntBASIC3.33□□□□□ -1.88
KRT4P19013 ZYXP1-201ENST00000617638 118 ntBASIC3.33□□□□□ -1.88
KRT4P19013 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.33□□□□□ -1.88
KRT4P19013 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRT4P19013 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
KRT4P19013 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.33□□□□□ -1.88
KRT4P19013 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KRT4P19013 AC007785.2-201ENST00000598627 1916 ntBASIC3.32□□□□□ -1.88
KRT4P19013 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRT4P19013 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.32□□□□□ -1.88
KRT4P19013 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.32□□□□□ -1.88
KRT4P19013 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRT4P19013 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.32□□□□□ -1.88
KRT4P19013 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.32□□□□□ -1.88
KRT4P19013 Y_RNA.122-201ENST00000363331 96 ntBASIC3.32□□□□□ -1.88
KRT4P19013 RNU6-512P-201ENST00000364438 103 ntBASIC3.32□□□□□ -1.88
KRT4P19013 RN7SKP227-201ENST00000364445 330 ntBASIC3.32□□□□□ -1.88
KRT4P19013 RNU6-384P-201ENST00000364900 104 ntBASIC3.32□□□□□ -1.88
KRT4P19013 RNU6-1025P-201ENST00000410629 104 ntBASIC3.32□□□□□ -1.88
KRT4P19013 RN7SKP123-201ENST00000410732 291 ntBASIC3.32□□□□□ -1.88
KRT4P19013 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.32□□□□□ -1.88
KRT4P19013 AL035423.1-201ENST00000420331 213 ntBASIC3.32□□□□□ -1.88
KRT4P19013 AL158156.1-201ENST00000422509 473 ntBASIC3.32□□□□□ -1.88
KRT4P19013 AC007389.2-201ENST00000434630 306 ntBASIC3.32□□□□□ -1.88
KRT4P19013 NDUFB4P6-201ENST00000436819 366 ntBASIC3.32□□□□□ -1.88
KRT4P19013 RNU7-175P-201ENST00000515915 61 ntBASIC3.32□□□□□ -1.88
KRT4P19013 Y_RNA.683-201ENST00000516508 93 ntBASIC3.32□□□□□ -1.88
KRT4P19013 RNU6-612P-201ENST00000516909 102 ntBASIC3.32□□□□□ -1.88
KRT4P19013 Y_RNA.706-201ENST00000516933 99 ntBASIC3.32□□□□□ -1.88
KRT4P19013 AC087441.2-201ENST00000529141 262 ntBASIC3.32□□□□□ -1.88
KRT4P19013 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.32□□□□□ -1.88
KRT4P19013 AC007458.1-201ENST00000542812 373 ntBASIC3.32□□□□□ -1.88
KRT4P19013 MZT1P2-201ENST00000604387 248 ntBASIC3.32□□□□□ -1.88
KRT4P19013 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.32□□□□□ -1.88
KRT4P19013 MIR7851-201ENST00000610611 160 ntBASIC3.32□□□□□ -1.88
KRT4P19013 uc_338.1-201ENST00000612113 180 ntBASIC3.32□□□□□ -1.88
KRT4P19013 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.32□□□□□ -1.88
KRT4P19013 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
KRT4P19013 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.32□□□□□ -1.88
KRT4P19013 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRT4P19013 AC110774.1-201ENST00000623567 2018 ntBASIC3.31□□□□□ -1.88
KRT4P19013 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.31□□□□□ -1.88
KRT4P19013 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRT4P19013 RNU6-1167P-201ENST00000363227 94 ntBASIC3.31□□□□□ -1.88
KRT4P19013 SNORD113-8-201ENST00000363497 74 ntBASIC3.31□□□□□ -1.88
KRT4P19013 RNU6-682P-201ENST00000363843 106 ntBASIC3.31□□□□□ -1.88
KRT4P19013 Y_RNA.405-201ENST00000383979 100 ntBASIC3.31□□□□□ -1.88
KRT4P19013 Y_RNA.451-201ENST00000384200 100 ntBASIC3.31□□□□□ -1.88
KRT4P19013 Y_RNA.524-201ENST00000384564 100 ntBASIC3.31□□□□□ -1.88
KRT4P19013 Y_RNA.561-201ENST00000384694 100 ntBASIC3.31□□□□□ -1.88
KRT4P19013 SNORD78.2-201ENST00000391076 69 ntBASIC3.31□□□□□ -1.88
KRT4P19013 AL079342.1-201ENST00000401460 267 ntBASIC3.31□□□□□ -1.88
KRT4P19013 AL033519.2-201ENST00000403958 392 ntBASIC3.31□□□□□ -1.88
KRT4P19013 AL031121.1-201ENST00000406553 254 ntBASIC3.31□□□□□ -1.88
KRT4P19013 AL592148.1-201ENST00000413568 445 ntBASIC3.31□□□□□ -1.88
KRT4P19013 RPL32P35-201ENST00000415214 394 ntBASIC3.31□□□□□ -1.88
KRT4P19013 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.31□□□□□ -1.88
KRT4P19013 TOMM20P4-201ENST00000427861 435 ntBASIC3.31□□□□□ -1.88
KRT4P19013 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms