Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AK6P1-201ENST00000540219 478 ntBASIC2.32□□□□□ -2.04
ERCC2P18074 HMGB1P33-201ENST00000563485 527 ntBASIC2.32□□□□□ -2.04
ERCC2P18074 MYL12BP1-201ENST00000569826 507 ntBASIC2.32□□□□□ -2.04
ERCC2P18074 AC009127.3-201ENST00000570531 403 ntBASIC2.32□□□□□ -2.04
ERCC2P18074 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
ERCC2P18074 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.32□□□□□ -2.04
ERCC2P18074 VN1R107P-201ENST00000601784 209 ntBASIC2.32□□□□□ -2.04
ERCC2P18074 AF250324.2-201ENST00000608299 610 ntBASIC2.32□□□□□ -2.04
ERCC2P18074 AC022202.1-201ENST00000613515 211 ntBASIC2.32□□□□□ -2.04
ERCC2P18074 AL161423.1-201ENST00000613700 262 ntBASIC2.32□□□□□ -2.04
ERCC2P18074 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ERCC2P18074 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ERCC2P18074 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ERCC2P18074 RNU6-944P-201ENST00000364023 107 ntBASIC2.31□□□□□ -2.04
ERCC2P18074 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ERCC2P18074 RNU6-43P-201ENST00000384302 107 ntBASIC2.31□□□□□ -2.04
ERCC2P18074 MIR221-201ENST00000385135 110 ntBASIC2.31□□□□□ -2.04
ERCC2P18074 RNU4-53P-201ENST00000410828 140 ntBASIC2.31□□□□□ -2.04
ERCC2P18074 EDDM3CP-201ENST00000415977 425 ntBASIC2.31□□□□□ -2.04
ERCC2P18074 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.31□□□□□ -2.04
ERCC2P18074 AC091885.1-201ENST00000506658 268 ntBASIC2.31□□□□□ -2.04
ERCC2P18074 AC010486.1-201ENST00000511793 424 ntBASIC2.31□□□□□ -2.04
ERCC2P18074 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.31□□□□□ -2.04
ERCC2P18074 Y_RNA.655-201ENST00000515919 96 ntBASIC2.31□□□□□ -2.04
ERCC2P18074 RNU6-1281P-201ENST00000516223 105 ntBASIC2.31□□□□□ -2.04
ERCC2P18074 RNU6-314P-201ENST00000516574 104 ntBASIC2.31□□□□□ -2.04
ERCC2P18074 RN7SKP256-201ENST00000517201 314 ntBASIC2.31□□□□□ -2.04
ERCC2P18074 AC034114.1-201ENST00000520293 285 ntBASIC2.31□□□□□ -2.04
ERCC2P18074 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.31□□□□□ -2.04
ERCC2P18074 AC115990.1-201ENST00000526957 301 ntBASIC2.31□□□□□ -2.04
ERCC2P18074 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.31□□□□□ -2.04
ERCC2P18074 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.31□□□□□ -2.04
ERCC2P18074 AC012557.2-201ENST00000605919 418 ntBASIC2.31□□□□□ -2.04
ERCC2P18074 AC063943.3-201ENST00000615562 356 ntBASIC2.31□□□□□ -2.04
ERCC2P18074 YWHAEP7-203ENST00000622054 312 ntBASIC2.31□□□□□ -2.04
ERCC2P18074 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
ERCC2P18074 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ERCC2P18074 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
ERCC2P18074 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ERCC2P18074 MIR29B2-201ENST00000385055 81 ntBASIC2.3□□□□□ -2.04
ERCC2P18074 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
ERCC2P18074 RNU2-32P-201ENST00000411193 191 ntBASIC2.3□□□□□ -2.04
ERCC2P18074 RNA5SP270-201ENST00000411361 118 ntBASIC2.3□□□□□ -2.04
ERCC2P18074 AF274854.1-201ENST00000413236 615 ntBASIC2.3□□□□□ -2.04
ERCC2P18074 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.3□□□□□ -2.04
ERCC2P18074 SNAP23P1-201ENST00000433229 246 ntBASIC2.3□□□□□ -2.04
ERCC2P18074 AL031659.1-201ENST00000447075 539 ntBASIC2.3□□□□□ -2.04
ERCC2P18074 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.3□□□□□ -2.04
ERCC2P18074 Y_RNA.654-201ENST00000497848 106 ntBASIC2.3□□□□□ -2.04
ERCC2P18074 RPL23AP94-201ENST00000512518 302 ntBASIC2.3□□□□□ -2.04
ERCC2P18074 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.3□□□□□ -2.04
ERCC2P18074 RNU6-720P-201ENST00000516363 108 ntBASIC2.3□□□□□ -2.04
ERCC2P18074 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.3□□□□□ -2.04
ERCC2P18074 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.3□□□□□ -2.04
ERCC2P18074 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.3□□□□□ -2.04
ERCC2P18074 AC233702.2-202ENST00000562547 291 ntBASIC2.3□□□□□ -2.04
ERCC2P18074 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.3□□□□□ -2.04
ERCC2P18074 AC092807.2-201ENST00000609367 243 ntBASIC2.3□□□□□ -2.04
ERCC2P18074 AL121757.2-201ENST00000611223 313 ntBASIC2.3□□□□□ -2.04
ERCC2P18074 MIR6895-201ENST00000613497 78 ntBASIC2.3□□□□□ -2.04
ERCC2P18074 AC012640.5-201ENST00000623897 319 ntBASIC2.3□□□□□ -2.04
ERCC2P18074 MTND5P6-201ENST00000422338 1798 ntBASIC2.3□□□□□ -2.04
ERCC2P18074 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.3□□□□□ -2.04
ERCC2P18074 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.29□□□□□ -2.04
ERCC2P18074 Y_RNA.3-201ENST00000362331 103 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 RNU6-1141P-201ENST00000364520 107 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 RNU6-546P-201ENST00000383991 107 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 MIR514A2-201ENST00000385131 88 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 MIR514A3-201ENST00000385132 88 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 HMGB3P2-201ENST00000411913 584 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 USP9YP18-201ENST00000425912 695 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 RPS15AP10-201ENST00000432472 382 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 SEPT14P3-201ENST00000439401 183 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 AL732372.2-207ENST00000445840 183 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 SEPT14P2-201ENST00000453405 183 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 RNU6-1208P-201ENST00000459588 107 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.29□□□□□ -2.04
ERCC2P18074 HMGB1P35-201ENST00000503360 598 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 SEPT14P4-201ENST00000513445 186 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 RNU6-1069P-201ENST00000516612 133 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 RNU6-667P-201ENST00000517186 102 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 RNU6-323P-201ENST00000521915 107 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 FO082796.1-201ENST00000523795 183 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 AC016957.1-201ENST00000534895 309 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 AP000763.2-201ENST00000540641 163 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.29□□□□□ -2.04
ERCC2P18074 AL162413.1-201ENST00000603198 110 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 AC009831.4-201ENST00000620744 325 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 MIR203B-201ENST00000636080 86 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ERCC2P18074 ZNF658B-202ENST00000615961 3375 ntBASIC2.29□□□□□ -2.04
ERCC2P18074 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
ERCC2P18074 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ERCC2P18074 SNORD32A-201ENST00000364805 84 ntBASIC2.28□□□□□ -2.04
ERCC2P18074 AL590002.1-201ENST00000406554 418 ntBASIC2.28□□□□□ -2.04
ERCC2P18074 SNORD23.1-201ENST00000408212 104 ntBASIC2.28□□□□□ -2.04
ERCC2P18074 Y_RNA.597-201ENST00000410463 100 ntBASIC2.28□□□□□ -2.04
ERCC2P18074 RNU2-48P-201ENST00000410694 191 ntBASIC2.28□□□□□ -2.04
ERCC2P18074 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.28□□□□□ -2.04
ERCC2P18074 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms