Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.14□□□□□ -2.23
CTLA4P16410 AL122001.1-201ENST00000457027 370 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 RNU6-333P-201ENST00000459117 107 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 RAP1BP2-201ENST00000478270 544 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.14□□□□□ -2.23
CTLA4P16410 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.14□□□□□ -2.23
CTLA4P16410 AC009646.1-201ENST00000510455 318 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.14□□□□□ -2.23
CTLA4P16410 SCARNA24.1-201ENST00000516465 137 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 AC115990.1-201ENST00000526957 301 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 AP002453.2-201ENST00000533503 320 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.14□□□□□ -2.23
CTLA4P16410 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.14□□□□□ -2.23
CTLA4P16410 MIR4298-201ENST00000584380 73 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 AC005771.1-201ENST00000585581 349 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 AC073539.2-201ENST00000597113 165 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 AL121992.2-201ENST00000606262 256 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 AC004223.4-201ENST00000612426 332 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 AC063943.3-201ENST00000615562 356 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 U4.7-201ENST00000638126 106 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 MTND5P17-201ENST00000418405 1603 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
CTLA4P16410 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CTLA4P16410 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CTLA4P16410 RNA5SP99-201ENST00000364020 114 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 SNORD115-7-201ENST00000365306 82 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.13□□□□□ -2.23
CTLA4P16410 CYCSP33-201ENST00000414485 327 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 C1DP2-201ENST00000418167 426 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 AL590556.1-201ENST00000423231 483 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.13□□□□□ -2.23
CTLA4P16410 UBE2D3P4-201ENST00000441973 436 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.13□□□□□ -2.23
CTLA4P16410 HSPE1P24-201ENST00000450782 238 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 RN7SKP210-201ENST00000459176 261 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 AC104806.1-201ENST00000508720 308 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 AC104136.1-201ENST00000512969 394 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 FABP5P5-201ENST00000515537 406 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 SNORA3.4-201ENST00000515969 96 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 RNU2-46P-201ENST00000517038 113 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 RNU6-1220P-201ENST00000517126 108 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 AL160236.1-201ENST00000556317 195 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.13□□□□□ -2.23
CTLA4P16410 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.13□□□□□ -2.23
CTLA4P16410 AC011458.1-201ENST00000604034 617 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 AL022161.1-201ENST00000604390 213 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 AC018889.1-201ENST00000605372 397 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 AL512598.1-201ENST00000610158 273 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 AC009159.2-201ENST00000617603 606 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 Z69720.2-201ENST00000624755 279 ntBASIC1.13□□□□□ -2.23
CTLA4P16410 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
CTLA4P16410 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.12□□□□□ -2.23
CTLA4P16410 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
CTLA4P16410 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.12□□□□□ -2.23
CTLA4P16410 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.12□□□□□ -2.23
CTLA4P16410 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CTLA4P16410 RNU6-527P-201ENST00000363425 104 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 RNU6-1285P-201ENST00000363480 105 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 MIR544A-201ENST00000384855 91 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 SNORA40.6-201ENST00000391153 128 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 OR6C66P-201ENST00000414917 930 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.12□□□□□ -2.23
CTLA4P16410 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.12□□□□□ -2.23
CTLA4P16410 AC104850.1-201ENST00000435940 476 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 AL121601.2-201ENST00000438019 707 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 AL035666.1-201ENST00000446195 348 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 SNRPFP4-201ENST00000456366 242 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.12□□□□□ -2.23
CTLA4P16410 AC005908.1-201ENST00000468701 347 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.12□□□□□ -2.23
CTLA4P16410 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.12□□□□□ -2.23
CTLA4P16410 AC005178.1-201ENST00000508392 440 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 AC074344.1-201ENST00000512823 224 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 RNU5F-2P-201ENST00000516066 82 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 Vault.3-201ENST00000516676 95 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 RN7SKP219-201ENST00000516825 296 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 AC090572.1-201ENST00000519251 160 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 AC090821.2-201ENST00000523552 176 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.12□□□□□ -2.23
CTLA4P16410 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.12□□□□□ -2.23
CTLA4P16410 MIR4421-201ENST00000578133 69 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.12□□□□□ -2.23
CTLA4P16410 MIR4422-201ENST00000581938 83 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 MIR3660-201ENST00000584845 100 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 AP000654.2-201ENST00000605633 586 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 MIR8074-201ENST00000615081 81 ntBASIC1.12□□□□□ -2.23
CTLA4P16410 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CTLA4P16410 MTND4P4-201ENST00000439033 1366 ntBASIC1.11□□□□□ -2.23
CTLA4P16410 RNU6-45P-201ENST00000384471 107 ntBASIC1.11□□□□□ -2.23
CTLA4P16410 RNU6-160P-201ENST00000384591 107 ntBASIC1.11□□□□□ -2.23
CTLA4P16410 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CTLA4P16410 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.11□□□□□ -2.23
CTLA4P16410 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CTLA4P16410 AC108667.1-201ENST00000428618 249 ntBASIC1.11□□□□□ -2.23
CTLA4P16410 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.11□□□□□ -2.23
CTLA4P16410 AC015922.2-201ENST00000435593 184 ntBASIC1.11□□□□□ -2.23
CTLA4P16410 AC073614.1-201ENST00000438690 650 ntBASIC1.11□□□□□ -2.23
CTLA4P16410 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.11□□□□□ -2.23
CTLA4P16410 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.11□□□□□ -2.23
CTLA4P16410 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms