Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 UBE2D3P3-201ENST00000426992 425 ntBASIC0.7□□□□□ -2.3
HLA-EP13747 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.7□□□□□ -2.3
HLA-EP13747 HSPE1P9-201ENST00000440046 311 ntBASIC0.7□□□□□ -2.3
HLA-EP13747 PGBD4P5-201ENST00000445958 426 ntBASIC0.7□□□□□ -2.3
HLA-EP13747 EEF1E1P1-201ENST00000446998 430 ntBASIC0.7□□□□□ -2.3
HLA-EP13747 ZNF886P-201ENST00000450781 723 ntBASIC0.7□□□□□ -2.3
HLA-EP13747 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.7□□□□□ -2.3
HLA-EP13747 AC114982.1-201ENST00000469402 321 ntBASIC0.7□□□□□ -2.3
HLA-EP13747 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.7□□□□□ -2.3
HLA-EP13747 MTND1P3-201ENST00000484956 952 ntBASIC0.7□□□□□ -2.3
HLA-EP13747 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.7□□□□□ -2.3
HLA-EP13747 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.7□□□□□ -2.3
HLA-EP13747 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.7□□□□□ -2.3
HLA-EP13747 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.7□□□□□ -2.3
HLA-EP13747 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.7□□□□□ -2.3
HLA-EP13747 AC022022.2-201ENST00000602989 360 ntBASIC0.7□□□□□ -2.3
HLA-EP13747 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
HLA-EP13747 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
HLA-EP13747 LINC02555-201ENST00000563933 1951 ntBASIC0.7□□□□□ -2.3
HLA-EP13747 Y_RNA.33-201ENST00000362591 102 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
HLA-EP13747 RNU6-360P-201ENST00000390944 104 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 RN7SKP200-201ENST00000410564 320 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 RNA5SP127-201ENST00000411051 133 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 MTCO1P17-201ENST00000411522 491 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
HLA-EP13747 AL358176.2-201ENST00000425769 204 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 C8orf59P1-201ENST00000429930 303 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.69□□□□□ -2.3
HLA-EP13747 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.69□□□□□ -2.3
HLA-EP13747 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
HLA-EP13747 MTND1P16-201ENST00000465177 898 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 AC009646.1-201ENST00000510455 318 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 AC027338.1-201ENST00000514840 825 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 AC026616.1-201ENST00000523157 525 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 OR8K2P-201ENST00000524645 927 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 DEFB108A-201ENST00000530110 222 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.69□□□□□ -2.3
HLA-EP13747 AC092451.2-201ENST00000538746 658 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
HLA-EP13747 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.69□□□□□ -2.3
HLA-EP13747 AP003465.2-201ENST00000602571 373 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 AC008945.2-201ENST00000606056 604 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 AC012467.1-201ENST00000607740 256 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 AC009033.1-201ENST00000624279 431 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 AC099654.5-201ENST00000636479 350 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 MTND5P42-201ENST00000637720 498 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 AC006927.2-201ENST00000639256 389 ntBASIC0.69□□□□□ -2.3
HLA-EP13747 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
HLA-EP13747 MIR330-201ENST00000362196 94 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
HLA-EP13747 SNORA75B-201ENST00000384053 137 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 Y_RNA.433-201ENST00000384089 102 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 RNU6-1065P-201ENST00000384513 106 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 MIR548B-201ENST00000385247 97 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 MTND3P20-201ENST00000407663 186 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 AL357139.1-201ENST00000407792 426 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.68□□□□□ -2.3
HLA-EP13747 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.68□□□□□ -2.3
HLA-EP13747 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.68□□□□□ -2.3
HLA-EP13747 FTH1P12-201ENST00000432137 551 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.68□□□□□ -2.3
HLA-EP13747 RNA5SP269-201ENST00000459032 137 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.68□□□□□ -2.3
HLA-EP13747 SNORA3.4-201ENST00000515969 96 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 RNU6-914P-201ENST00000516749 109 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.68□□□□□ -2.3
HLA-EP13747 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
HLA-EP13747 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.68□□□□□ -2.3
HLA-EP13747 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.68□□□□□ -2.3
HLA-EP13747 HMGB1P33-201ENST00000563485 527 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.68□□□□□ -2.3
HLA-EP13747 AC015688.6-201ENST00000577737 104 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.68□□□□□ -2.3
HLA-EP13747 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.68□□□□□ -2.3
HLA-EP13747 AP000654.2-201ENST00000605633 586 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
HLA-EP13747 MIR8065-201ENST00000620577 100 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 AC243829.3-201ENST00000622177 108 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 AC091925.1-201ENST00000623204 462 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 AC099654.8-201ENST00000637757 681 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 AC008163.1-202ENST00000636004 2889 ntBASIC0.68□□□□□ -2.3
HLA-EP13747 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
HLA-EP13747 AC245060.5-201ENST00000610778 3293 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 RNU1-124P-201ENST00000363861 145 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 Y_RNA.255-201ENST00000364581 97 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 SNORD116-20-201ENST00000384529 92 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 RNU6-278P-201ENST00000390945 109 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 RNA5SP193-201ENST00000410353 107 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.67□□□□□ -2.3
HLA-EP13747 AL161935.2-201ENST00000414627 60 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 AL365338.1-201ENST00000422282 858 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 AL606490.4-201ENST00000423117 127 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.67□□□□□ -2.3
HLA-EP13747 RPS27AP8-201ENST00000452665 445 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.67□□□□□ -2.3
HLA-EP13747 RNU1-131P-201ENST00000458943 161 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 RNU6-333P-201ENST00000459117 107 ntBASIC0.67□□□□□ -2.3
HLA-EP13747 snoU109.2-201ENST00000459316 135 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms