Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 RNU6-468P-201ENST00000384003 109 ntBASIC0.28□□□□□ -2.36
TPRP12270 SNORA25-201ENST00000384384 134 ntBASIC0.28□□□□□ -2.36
TPRP12270 RNU6-160P-201ENST00000384591 107 ntBASIC0.28□□□□□ -2.36
TPRP12270 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
TPRP12270 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
TPRP12270 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
TPRP12270 AL590084.2-201ENST00000401481 382 ntBASIC0.28□□□□□ -2.36
TPRP12270 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.28□□□□□ -2.36
TPRP12270 RPS3AP37-201ENST00000419176 745 ntBASIC0.28□□□□□ -2.36
TPRP12270 MTCO2P5-201ENST00000422621 426 ntBASIC0.28□□□□□ -2.36
TPRP12270 MTND4P25-201ENST00000441039 533 ntBASIC0.28□□□□□ -2.36
TPRP12270 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.28□□□□□ -2.36
TPRP12270 AC016717.1-201ENST00000448918 286 ntBASIC0.28□□□□□ -2.36
TPRP12270 snoU13.8-201ENST00000458890 104 ntBASIC0.28□□□□□ -2.36
TPRP12270 AC116655.1-201ENST00000508324 901 ntBASIC0.28□□□□□ -2.36
TPRP12270 AC074344.1-201ENST00000512823 224 ntBASIC0.28□□□□□ -2.36
TPRP12270 MTCYBP43-201ENST00000513621 740 ntBASIC0.28□□□□□ -2.36
TPRP12270 RNU6-703P-201ENST00000516946 107 ntBASIC0.28□□□□□ -2.36
TPRP12270 RN7SKP256-201ENST00000517201 314 ntBASIC0.28□□□□□ -2.36
TPRP12270 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.28□□□□□ -2.36
TPRP12270 AP003034.1-201ENST00000534621 422 ntBASIC0.28□□□□□ -2.36
TPRP12270 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.28□□□□□ -2.36
TPRP12270 AC018630.3-201ENST00000542637 96 ntBASIC0.28□□□□□ -2.36
TPRP12270 AC087897.1-201ENST00000550134 156 ntBASIC0.28□□□□□ -2.36
TPRP12270 MIR5708-201ENST00000579723 85 ntBASIC0.28□□□□□ -2.36
TPRP12270 U1.36-201ENST00000620684 176 ntBASIC0.28□□□□□ -2.36
TPRP12270 AP000676.3-201ENST00000623299 569 ntBASIC0.28□□□□□ -2.36
TPRP12270 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.28□□□□□ -2.36
TPRP12270 AC138393.1-203ENST00000327086 343 ntBASIC0.28□□□□□ -2.36
TPRP12270 MIR424-201ENST00000362227 98 ntBASIC0.28□□□□□ -2.36
TPRP12270 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
TPRP12270 RNU6-505P-201ENST00000384427 107 ntBASIC0.28□□□□□ -2.36
TPRP12270 Y_RNA.559-201ENST00000384686 107 ntBASIC0.28□□□□□ -2.36
TPRP12270 MIR506-201ENST00000384998 124 ntBASIC0.28□□□□□ -2.36
TPRP12270 AL669831.1-202ENST00000428504 417 ntBASIC0.28□□□□□ -2.36
TPRP12270 SEPT7P5-201ENST00000434048 306 ntBASIC0.28□□□□□ -2.36
TPRP12270 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.28□□□□□ -2.36
TPRP12270 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.28□□□□□ -2.36
TPRP12270 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.28□□□□□ -2.36
TPRP12270 RPL30P1-201ENST00000488676 339 ntBASIC0.28□□□□□ -2.36
TPRP12270 AC145146.1-201ENST00000496370 254 ntBASIC0.28□□□□□ -2.36
TPRP12270 RNU6-390P-201ENST00000516259 103 ntBASIC0.28□□□□□ -2.36
TPRP12270 SNORA31.17-201ENST00000516953 127 ntBASIC0.28□□□□□ -2.36
TPRP12270 RNU6-165P-201ENST00000517170 99 ntBASIC0.28□□□□□ -2.36
TPRP12270 RNU6-667P-201ENST00000517186 102 ntBASIC0.28□□□□□ -2.36
TPRP12270 AL133153.1-201ENST00000557756 303 ntBASIC0.28□□□□□ -2.36
TPRP12270 AC126365.2-201ENST00000580630 379 ntBASIC0.28□□□□□ -2.36
TPRP12270 MTATP6P2-201ENST00000603319 678 ntBASIC0.28□□□□□ -2.36
TPRP12270 AC090578.1-201ENST00000604955 591 ntBASIC0.28□□□□□ -2.36
TPRP12270 AP001033.2-201ENST00000609701 1003 ntBASIC0.28□□□□□ -2.36
TPRP12270 AC107982.1-201ENST00000507171 1300 ntBASIC0.28□□□□□ -2.36
TPRP12270 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.27□□□□□ -2.37
TPRP12270 RNU6-1010P-201ENST00000362757 107 ntBASIC0.27□□□□□ -2.37
TPRP12270 SNORD33-201ENST00000362761 85 ntBASIC0.27□□□□□ -2.37
TPRP12270 SNORD1A-201ENST00000364968 72 ntBASIC0.27□□□□□ -2.37
TPRP12270 RNU6-438P-201ENST00000365561 103 ntBASIC0.27□□□□□ -2.37
TPRP12270 RNU6-549P-201ENST00000384433 107 ntBASIC0.27□□□□□ -2.37
TPRP12270 SNORD116-20-201ENST00000384529 92 ntBASIC0.27□□□□□ -2.37
TPRP12270 RNU6-1274P-201ENST00000384557 107 ntBASIC0.27□□□□□ -2.37
TPRP12270 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
TPRP12270 SNORA12-201ENST00000391162 147 ntBASIC0.27□□□□□ -2.37
TPRP12270 RNU2-23P-201ENST00000410545 195 ntBASIC0.27□□□□□ -2.37
TPRP12270 BX664727.1-201ENST00000416024 466 ntBASIC0.27□□□□□ -2.37
TPRP12270 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.27□□□□□ -2.37
TPRP12270 AC099677.2-201ENST00000436385 175 ntBASIC0.27□□□□□ -2.37
TPRP12270 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
TPRP12270 HSPE1P13-201ENST00000451143 297 ntBASIC0.27□□□□□ -2.37
TPRP12270 AL157398.1-201ENST00000452981 186 ntBASIC0.27□□□□□ -2.37
TPRP12270 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.27□□□□□ -2.37
TPRP12270 AC108729.2-201ENST00000476543 840 ntBASIC0.27□□□□□ -2.37
TPRP12270 MTND5P13-201ENST00000513046 1079 ntBASIC0.27□□□□□ -2.37
TPRP12270 AC091163.3-201ENST00000518269 1144 ntBASIC0.27□□□□□ -2.37
TPRP12270 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.27□□□□□ -2.37
TPRP12270 MTCO2P15-201ENST00000532655 656 ntBASIC0.27□□□□□ -2.37
TPRP12270 HMGB1P33-201ENST00000563485 527 ntBASIC0.27□□□□□ -2.37
TPRP12270 MIR3912-201ENST00000577566 105 ntBASIC0.27□□□□□ -2.37
TPRP12270 VN1R83P-201ENST00000595685 445 ntBASIC0.27□□□□□ -2.37
TPRP12270 AC005261.5-201ENST00000596280 355 ntBASIC0.27□□□□□ -2.37
TPRP12270 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.27□□□□□ -2.37
TPRP12270 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
TPRP12270 SNORD118-201ENST00000363593 134 ntBASIC0.27□□□□□ -2.37
TPRP12270 RNU6-289P-201ENST00000364093 107 ntBASIC0.27□□□□□ -2.37
TPRP12270 RNU6-1280P-201ENST00000365211 107 ntBASIC0.27□□□□□ -2.37
TPRP12270 SNORA75B-201ENST00000384053 137 ntBASIC0.27□□□□□ -2.37
TPRP12270 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
TPRP12270 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.27□□□□□ -2.37
TPRP12270 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.27□□□□□ -2.37
TPRP12270 MTND1P30-201ENST00000441241 901 ntBASIC0.27□□□□□ -2.37
TPRP12270 PGBD4P5-201ENST00000445958 426 ntBASIC0.27□□□□□ -2.37
TPRP12270 MTCO2P25-201ENST00000447065 681 ntBASIC0.27□□□□□ -2.37
TPRP12270 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
TPRP12270 AC092001.1-201ENST00000453012 261 ntBASIC0.27□□□□□ -2.37
TPRP12270 CECR9-201ENST00000453421 199 ntBASIC0.27□□□□□ -2.37
TPRP12270 MED28P2-201ENST00000475771 317 ntBASIC0.27□□□□□ -2.37
TPRP12270 MTND2P33-201ENST00000506452 1031 ntBASIC0.27□□□□□ -2.37
TPRP12270 MTCO3P15-201ENST00000526563 574 ntBASIC0.27□□□□□ -2.37
TPRP12270 ZNF971P-201ENST00000562068 1249 ntBASIC0.27□□□□□ -2.37
TPRP12270 AC060771.1-201ENST00000582031 164 ntBASIC0.27□□□□□ -2.37
TPRP12270 AC100812.1-201ENST00000607622 580 ntBASIC0.27□□□□□ -2.37
TPRP12270 AC027335.2-201ENST00000624030 375 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms