Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.23□□□□□ -2.05
KRT3P12035 RNU6-333P-201ENST00000459117 107 ntBASIC2.23□□□□□ -2.05
KRT3P12035 AC080013.2-201ENST00000460866 323 ntBASIC2.23□□□□□ -2.05
KRT3P12035 RPL7P43-201ENST00000478876 753 ntBASIC2.23□□□□□ -2.05
KRT3P12035 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.23□□□□□ -2.05
KRT3P12035 MTCYBP40-201ENST00000509390 1135 ntBASIC2.23□□□□□ -2.05
KRT3P12035 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.23□□□□□ -2.05
KRT3P12035 AC008413.1-201ENST00000511864 177 ntBASIC2.23□□□□□ -2.05
KRT3P12035 RNU6-835P-201ENST00000516974 104 ntBASIC2.23□□□□□ -2.05
KRT3P12035 AC109479.2-201ENST00000517842 174 ntBASIC2.23□□□□□ -2.05
KRT3P12035 CENPUP1-201ENST00000526649 1202 ntBASIC2.23□□□□□ -2.05
KRT3P12035 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.23□□□□□ -2.05
KRT3P12035 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.23□□□□□ -2.05
KRT3P12035 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.23□□□□□ -2.05
KRT3P12035 AC136619.2-201ENST00000563361 631 ntBASIC2.23□□□□□ -2.05
KRT3P12035 AL138976.2-201ENST00000563989 694 ntBASIC2.23□□□□□ -2.05
KRT3P12035 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.23□□□□□ -2.05
KRT3P12035 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.22□□□□□ -2.05
KRT3P12035 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
KRT3P12035 snoU2_19.1-201ENST00000362361 80 ntBASIC2.22□□□□□ -2.05
KRT3P12035 Y_RNA.38-201ENST00000362617 102 ntBASIC2.22□□□□□ -2.05
KRT3P12035 RNU6-655P-201ENST00000362858 107 ntBASIC2.22□□□□□ -2.05
KRT3P12035 RNU4-52P-201ENST00000384209 138 ntBASIC2.22□□□□□ -2.05
KRT3P12035 RNU6-622P-201ENST00000384272 103 ntBASIC2.22□□□□□ -2.05
KRT3P12035 Y_RNA.516-201ENST00000384541 124 ntBASIC2.22□□□□□ -2.05
KRT3P12035 SNORD73A-201ENST00000386062 65 ntBASIC2.22□□□□□ -2.05
KRT3P12035 RNA5SP390-201ENST00000410191 113 ntBASIC2.22□□□□□ -2.05
KRT3P12035 AL135786.1-201ENST00000415892 214 ntBASIC2.22□□□□□ -2.05
KRT3P12035 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.22□□□□□ -2.05
KRT3P12035 AC008267.5-201ENST00000424928 265 ntBASIC2.22□□□□□ -2.05
KRT3P12035 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.22□□□□□ -2.05
KRT3P12035 USP9YP8-201ENST00000441913 500 ntBASIC2.22□□□□□ -2.05
KRT3P12035 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.22□□□□□ -2.05
KRT3P12035 AC018437.1-201ENST00000492214 406 ntBASIC2.22□□□□□ -2.05
KRT3P12035 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.22□□□□□ -2.05
KRT3P12035 OR11H5P-201ENST00000554039 926 ntBASIC2.22□□□□□ -2.05
KRT3P12035 AL118558.2-201ENST00000556294 238 ntBASIC2.22□□□□□ -2.05
KRT3P12035 AL133241.1-201ENST00000556832 487 ntBASIC2.22□□□□□ -2.05
KRT3P12035 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.22□□□□□ -2.05
KRT3P12035 MIR3941-201ENST00000582572 103 ntBASIC2.22□□□□□ -2.05
KRT3P12035 AC010525.2-201ENST00000590920 195 ntBASIC2.22□□□□□ -2.05
KRT3P12035 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.22□□□□□ -2.05
KRT3P12035 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
KRT3P12035 AL590808.1-201ENST00000618696 141 ntBASIC2.22□□□□□ -2.05
KRT3P12035 HAUS6P2-201ENST00000433254 2404 ntBASIC2.22□□□□□ -2.05
KRT3P12035 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
KRT3P12035 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRT3P12035 OR4G1P-203ENST00000641984 1631 ntBASIC2.21□□□□□ -2.06
KRT3P12035 RNU6-1010P-201ENST00000362757 107 ntBASIC2.21□□□□□ -2.06
KRT3P12035 RNU6-105P-201ENST00000363909 104 ntBASIC2.21□□□□□ -2.06
KRT3P12035 RNU6-336P-201ENST00000364891 107 ntBASIC2.21□□□□□ -2.06
KRT3P12035 RNA5SP37-201ENST00000365420 130 ntBASIC2.21□□□□□ -2.06
KRT3P12035 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
KRT3P12035 U3.40-201ENST00000408706 208 ntBASIC2.21□□□□□ -2.06
KRT3P12035 RNA5SP270-201ENST00000411361 118 ntBASIC2.21□□□□□ -2.06
KRT3P12035 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.21□□□□□ -2.06
KRT3P12035 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.21□□□□□ -2.06
KRT3P12035 Z98742.3-201ENST00000418637 326 ntBASIC2.21□□□□□ -2.06
KRT3P12035 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.21□□□□□ -2.06
KRT3P12035 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.21□□□□□ -2.06
KRT3P12035 AC003685.2-201ENST00000422795 395 ntBASIC2.21□□□□□ -2.06
KRT3P12035 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.21□□□□□ -2.06
KRT3P12035 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.21□□□□□ -2.06
KRT3P12035 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.21□□□□□ -2.06
KRT3P12035 CYP2C59P-201ENST00000457790 269 ntBASIC2.21□□□□□ -2.06
KRT3P12035 AC117503.1-201ENST00000472241 394 ntBASIC2.21□□□□□ -2.06
KRT3P12035 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.21□□□□□ -2.06
KRT3P12035 AC083904.1-201ENST00000487828 231 ntBASIC2.21□□□□□ -2.06
KRT3P12035 SNORA14.1-201ENST00000516113 141 ntBASIC2.21□□□□□ -2.06
KRT3P12035 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.21□□□□□ -2.06
KRT3P12035 CYCSP27-201ENST00000527643 293 ntBASIC2.21□□□□□ -2.06
KRT3P12035 AC025423.5-201ENST00000550230 219 ntBASIC2.21□□□□□ -2.06
KRT3P12035 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.21□□□□□ -2.06
KRT3P12035 AC093249.1-201ENST00000567049 203 ntBASIC2.21□□□□□ -2.06
KRT3P12035 MIR4424-201ENST00000585257 86 ntBASIC2.21□□□□□ -2.06
KRT3P12035 AC092807.2-201ENST00000609367 243 ntBASIC2.21□□□□□ -2.06
KRT3P12035 DISC2.1-201ENST00000612827 205 ntBASIC2.21□□□□□ -2.06
KRT3P12035 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KRT3P12035 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
KRT3P12035 AC027514.1-201ENST00000588561 1603 ntBASIC2.2□□□□□ -2.06
KRT3P12035 AP006437.1-201ENST00000641440 3685 ntBASIC2.2□□□□□ -2.06
KRT3P12035 RNU6-487P-201ENST00000365430 104 ntBASIC2.2□□□□□ -2.06
KRT3P12035 RNU6-692P-201ENST00000384496 107 ntBASIC2.2□□□□□ -2.06
KRT3P12035 RNU6-648P-201ENST00000410190 107 ntBASIC2.2□□□□□ -2.06
KRT3P12035 RNU2-23P-201ENST00000410545 195 ntBASIC2.2□□□□□ -2.06
KRT3P12035 RNA5SP508-201ENST00000411327 119 ntBASIC2.2□□□□□ -2.06
KRT3P12035 AIMP1P2-201ENST00000425294 312 ntBASIC2.2□□□□□ -2.06
KRT3P12035 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.2□□□□□ -2.06
KRT3P12035 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.2□□□□□ -2.06
KRT3P12035 AL161788.1-201ENST00000441805 169 ntBASIC2.2□□□□□ -2.06
KRT3P12035 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.2□□□□□ -2.06
KRT3P12035 AC090255.1-201ENST00000495779 349 ntBASIC2.2□□□□□ -2.06
KRT3P12035 AF213884.2-201ENST00000510417 903 ntBASIC2.2□□□□□ -2.06
KRT3P12035 SNORA19.2-201ENST00000516013 114 ntBASIC2.2□□□□□ -2.06
KRT3P12035 AC104576.1-201ENST00000524225 88 ntBASIC2.2□□□□□ -2.06
KRT3P12035 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.2□□□□□ -2.06
KRT3P12035 AC090115.3-201ENST00000553218 849 ntBASIC2.2□□□□□ -2.06
KRT3P12035 MIR4435-1-201ENST00000582552 80 ntBASIC2.2□□□□□ -2.06
KRT3P12035 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.2□□□□□ -2.06
KRT3P12035 AC009233.1-201ENST00000616477 371 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms