Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 MIR3124-201ENST00000582636 67 ntBASIC4.26□□□□□ -1.73
RARAP10276 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.26□□□□□ -1.73
RARAP10276 AL445567.2-201ENST00000618935 498 ntBASIC4.26□□□□□ -1.73
RARAP10276 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.26□□□□□ -1.73
RARAP10276 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
RARAP10276 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
RARAP10276 AC099654.7-201ENST00000635788 2127 ntBASIC4.25□□□□□ -1.73
RARAP10276 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RARAP10276 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.25□□□□□ -1.73
RARAP10276 AL136964.1-201ENST00000622038 2990 ntBASIC4.25□□□□□ -1.73
RARAP10276 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RARAP10276 Y_RNA.121-201ENST00000363309 113 ntBASIC4.25□□□□□ -1.73
RARAP10276 RNU4-17P-201ENST00000365598 141 ntBASIC4.25□□□□□ -1.73
RARAP10276 AL512633.1-201ENST00000399931 655 ntBASIC4.25□□□□□ -1.73
RARAP10276 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.25□□□□□ -1.73
RARAP10276 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.25□□□□□ -1.73
RARAP10276 AC007215.1-201ENST00000464893 276 ntBASIC4.25□□□□□ -1.73
RARAP10276 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.25□□□□□ -1.73
RARAP10276 RNU6-426P-201ENST00000516464 97 ntBASIC4.25□□□□□ -1.73
RARAP10276 CYCSP29-201ENST00000533731 318 ntBASIC4.25□□□□□ -1.73
RARAP10276 AL591034.3-201ENST00000605511 685 ntBASIC4.25□□□□□ -1.73
RARAP10276 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RARAP10276 MIR8059-201ENST00000620427 81 ntBASIC4.25□□□□□ -1.73
RARAP10276 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.25□□□□□ -1.73
RARAP10276 Z82217.1-201ENST00000625157 8149 ntBASIC4.25□□□□□ -1.73
RARAP10276 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.25□□□□□ -1.73
RARAP10276 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RARAP10276 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
RARAP10276 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RARAP10276 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RARAP10276 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
RARAP10276 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RARAP10276 RNU6-799P-201ENST00000363567 107 ntBASIC4.24□□□□□ -1.73
RARAP10276 RNU6-525P-201ENST00000363685 104 ntBASIC4.24□□□□□ -1.73
RARAP10276 Y_RNA.182-201ENST00000363880 111 ntBASIC4.24□□□□□ -1.73
RARAP10276 RNA5SP515-201ENST00000364570 118 ntBASIC4.24□□□□□ -1.73
RARAP10276 Y_RNA.357-201ENST00000365487 109 ntBASIC4.24□□□□□ -1.73
RARAP10276 RNU6-793P-201ENST00000384233 104 ntBASIC4.24□□□□□ -1.73
RARAP10276 MIR549A-201ENST00000385268 96 ntBASIC4.24□□□□□ -1.73
RARAP10276 RNU6-1248P-201ENST00000391096 64 ntBASIC4.24□□□□□ -1.73
RARAP10276 RNU2-54P-201ENST00000410299 190 ntBASIC4.24□□□□□ -1.73
RARAP10276 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.24□□□□□ -1.73
RARAP10276 HMGB1P37-201ENST00000439613 609 ntBASIC4.24□□□□□ -1.73
RARAP10276 RPL39P29-201ENST00000447779 157 ntBASIC4.24□□□□□ -1.73
RARAP10276 RPL29P14-201ENST00000495837 428 ntBASIC4.24□□□□□ -1.73
RARAP10276 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.24□□□□□ -1.73
RARAP10276 SNORA31.16-201ENST00000516773 139 ntBASIC4.24□□□□□ -1.73
RARAP10276 RNA5SP143-201ENST00000516936 115 ntBASIC4.24□□□□□ -1.73
RARAP10276 AP003730.1-201ENST00000524605 285 ntBASIC4.24□□□□□ -1.73
RARAP10276 AP002001.1-203ENST00000534002 267 ntBASIC4.24□□□□□ -1.73
RARAP10276 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.24□□□□□ -1.73
RARAP10276 MIR4284-201ENST00000578924 81 ntBASIC4.24□□□□□ -1.73
RARAP10276 RN7SL600P-201ENST00000581811 299 ntBASIC4.24□□□□□ -1.73
RARAP10276 MIR5684-201ENST00000585074 65 ntBASIC4.24□□□□□ -1.73
RARAP10276 ARF4P1-201ENST00000605447 541 ntBASIC4.24□□□□□ -1.73
RARAP10276 MIR486-1-201ENST00000612171 68 ntBASIC4.24□□□□□ -1.73
RARAP10276 MIR3529-201ENST00000637713 78 ntBASIC4.24□□□□□ -1.73
RARAP10276 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.24□□□□□ -1.73
RARAP10276 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.24□□□□□ -1.73
RARAP10276 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RARAP10276 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.24□□□□□ -1.73
RARAP10276 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
RARAP10276 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RARAP10276 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.24□□□□□ -1.73
RARAP10276 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
RARAP10276 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RARAP10276 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RARAP10276 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RARAP10276 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.23□□□□□ -1.73
RARAP10276 ADAM3A-203ENST00000461344 2157 ntBASIC4.23□□□□□ -1.73
RARAP10276 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.23□□□□□ -1.73
RARAP10276 AC126755.2-208ENST00000327792 462 ntBASIC4.23□□□□□ -1.73
RARAP10276 AC138969.1-213ENST00000331436 462 ntBASIC4.23□□□□□ -1.73
RARAP10276 SNORD35B-201ENST00000363660 87 ntBASIC4.23□□□□□ -1.73
RARAP10276 RNU6-1310P-201ENST00000384153 107 ntBASIC4.23□□□□□ -1.73
RARAP10276 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RARAP10276 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.23□□□□□ -1.73
RARAP10276 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
RARAP10276 AC078817.1-201ENST00000492623 435 ntBASIC4.23□□□□□ -1.73
RARAP10276 RNU6-581P-201ENST00000516214 105 ntBASIC4.23□□□□□ -1.73
RARAP10276 Vault.1-201ENST00000516474 102 ntBASIC4.23□□□□□ -1.73
RARAP10276 GNRHR2P1-201ENST00000555315 631 ntBASIC4.23□□□□□ -1.73
RARAP10276 PARP1P2-201ENST00000556806 195 ntBASIC4.23□□□□□ -1.73
RARAP10276 Y_RNA.778-201ENST00000620203 90 ntBASIC4.23□□□□□ -1.73
RARAP10276 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.23□□□□□ -1.73
RARAP10276 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.23□□□□□ -1.73
RARAP10276 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.23□□□□□ -1.73
RARAP10276 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RARAP10276 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.23□□□□□ -1.73
RARAP10276 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RARAP10276 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RARAP10276 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.22□□□□□ -1.73
RARAP10276 RNU6-818P-201ENST00000364837 108 ntBASIC4.22□□□□□ -1.73
RARAP10276 RNU6-245P-201ENST00000384020 107 ntBASIC4.22□□□□□ -1.73
RARAP10276 RNA5SP390-201ENST00000410191 113 ntBASIC4.22□□□□□ -1.73
RARAP10276 RNU6-257P-201ENST00000410238 98 ntBASIC4.22□□□□□ -1.73
RARAP10276 Y_RNA.629-201ENST00000411368 105 ntBASIC4.22□□□□□ -1.73
RARAP10276 AC009963.1-201ENST00000417265 157 ntBASIC4.22□□□□□ -1.73
RARAP10276 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.22□□□□□ -1.73
RARAP10276 Y_RNA.637-201ENST00000459424 114 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms