Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.99□□□□□ -1.61
CSB-PGBD3P0DP91 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 RNU6-1130P-201ENST00000365434 107 ntBASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 RPS4XP3-201ENST00000398541 413 ntBASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 RN7SKP53-201ENST00000411337 315 ntBASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 RPL23AP36-201ENST00000413895 458 ntBASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 RPL21P10-201ENST00000463521 490 ntBASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 RPL23AP14-201ENST00000468281 468 ntBASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 RAC1P2-201ENST00000511164 579 ntBASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 RNA5SP309-201ENST00000516670 106 ntBASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 MIR4308-201ENST00000580634 81 ntBASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 MIR8058-201ENST00000615737 89 ntBASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 MIR6134-201ENST00000617606 109 ntBASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 AC007656.2-201ENST00000624902 4547 ntBASIC4.98□□□□□ -1.61
CSB-PGBD3P0DP91 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 SNORD9-201ENST00000362566 104 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 Y_RNA.82-201ENST00000363000 102 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 RNU6-942P-201ENST00000363002 107 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 Y_RNA.92-201ENST00000363043 102 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 RNU6-270P-201ENST00000364131 105 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 Y_RNA.235-201ENST00000364412 102 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 Y_RNA.306-201ENST00000365015 102 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 Y_RNA.312-201ENST00000365089 102 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 Y_RNA.322-201ENST00000365151 102 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 RNU5E-9P-201ENST00000411164 104 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 AC099548.1-201ENST00000421443 426 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 SNORA71B-202ENST00000439232 272 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 Y_RNA.650-201ENST00000459002 102 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 RPS27AP10-201ENST00000496103 208 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 Y_RNA.777-201ENST00000516982 102 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 AC010928.2-201ENST00000588017 287 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 Y_RNA.771-201ENST00000598668 102 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 AL365222.1-201ENST00000614661 98 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 Y_RNA.789-201ENST00000622480 102 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 AC073308.1-201ENST00000623696 305 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 ZNF826P-207ENST00000622273 1910 ntBASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CSB-PGBD3P0DP91 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.96□□□□□ -1.61
CSB-PGBD3P0DP91 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
CSB-PGBD3P0DP91 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 Y_RNA.111-201ENST00000363248 100 ntBASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 Y_RNA.441-201ENST00000384123 112 ntBASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 SNORA1.3-201ENST00000384676 136 ntBASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 RNU6-131P-201ENST00000391144 107 ntBASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 BTF3L4P2-201ENST00000392798 346 ntBASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 RPL26P9-201ENST00000457466 433 ntBASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 AP001025.1-201ENST00000486139 332 ntBASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 AC140059.1-201ENST00000489238 361 ntBASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 RPS29P20-201ENST00000489592 171 ntBASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 RN7SKP272-201ENST00000516988 232 ntBASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 HIGD1AP1-201ENST00000550979 275 ntBASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 CYP4A43P-201ENST00000568156 121 ntBASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.96□□□□□ -1.62
CSB-PGBD3P0DP91 AC135776.4-201ENST00000624300 1904 ntBASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 SNORA25.1-201ENST00000362326 128 ntBASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 Y_RNA.308-201ENST00000365043 101 ntBASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 SNORD116-18-201ENST00000383961 92 ntBASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 Y_RNA.497-201ENST00000384447 98 ntBASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 RNU6-417P-201ENST00000384712 107 ntBASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 RNU6-1168P-201ENST00000390831 104 ntBASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 RNA5SP146-201ENST00000410743 123 ntBASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 snoU13.30-201ENST00000458951 104 ntBASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 RPS29P2-201ENST00000479278 136 ntBASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 AC091959.1-201ENST00000495857 238 ntBASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 RNA5SP208-201ENST00000516156 78 ntBASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 NACAP3-201ENST00000552100 481 ntBASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 AC037487.3-201ENST00000606668 112 ntBASIC4.95□□□□□ -1.62
CSB-PGBD3P0DP91 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms