Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC145146.1-201ENST00000496370 254 ntBASIC0.89□□□□□ -2.27
TPM3P06753 RNU2-10P-201ENST00000516375 211 ntBASIC0.89□□□□□ -2.27
TPM3P06753 RNA5SP503-201ENST00000517047 117 ntBASIC0.89□□□□□ -2.27
TPM3P06753 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.89□□□□□ -2.27
TPM3P06753 CBX3P8-201ENST00000532412 525 ntBASIC0.89□□□□□ -2.27
TPM3P06753 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.89□□□□□ -2.27
TPM3P06753 MIR3664-201ENST00000579074 99 ntBASIC0.89□□□□□ -2.27
TPM3P06753 AC144521.1-201ENST00000607148 956 ntBASIC0.89□□□□□ -2.27
TPM3P06753 AC106800.4-201ENST00000614905 153 ntBASIC0.89□□□□□ -2.27
TPM3P06753 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.89□□□□□ -2.27
TPM3P06753 MIR6866-201ENST00000638146 69 ntBASIC0.89□□□□□ -2.27
TPM3P06753 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
TPM3P06753 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.89□□□□□ -2.27
TPM3P06753 RNU6-331P-201ENST00000384724 107 ntBASIC0.88□□□□□ -2.27
TPM3P06753 MIR100-201ENST00000385259 80 ntBASIC0.88□□□□□ -2.27
TPM3P06753 MIR764-201ENST00000390811 85 ntBASIC0.88□□□□□ -2.27
TPM3P06753 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.88□□□□□ -2.27
TPM3P06753 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.88□□□□□ -2.27
TPM3P06753 AC116353.3-201ENST00000511215 249 ntBASIC0.88□□□□□ -2.27
TPM3P06753 SCARNA16.2-201ENST00000516520 172 ntBASIC0.88□□□□□ -2.27
TPM3P06753 AC013828.2-201ENST00000532487 235 ntBASIC0.88□□□□□ -2.27
TPM3P06753 AC023050.2-201ENST00000544968 387 ntBASIC0.88□□□□□ -2.27
TPM3P06753 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.88□□□□□ -2.27
TPM3P06753 AP005136.1-201ENST00000579765 429 ntBASIC0.88□□□□□ -2.27
TPM3P06753 AL034555.1-201ENST00000604816 211 ntBASIC0.88□□□□□ -2.27
TPM3P06753 AC108747.1-201ENST00000609508 535 ntBASIC0.88□□□□□ -2.27
TPM3P06753 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
TPM3P06753 RNU6-862P-201ENST00000362804 105 ntBASIC0.87□□□□□ -2.27
TPM3P06753 RNU6-1179P-201ENST00000384667 107 ntBASIC0.87□□□□□ -2.27
TPM3P06753 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.87□□□□□ -2.27
TPM3P06753 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.87□□□□□ -2.27
TPM3P06753 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.87□□□□□ -2.27
TPM3P06753 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.87□□□□□ -2.27
TPM3P06753 ATP5J2P3-201ENST00000451550 258 ntBASIC0.87□□□□□ -2.27
TPM3P06753 SNRPFP4-201ENST00000456366 242 ntBASIC0.87□□□□□ -2.27
TPM3P06753 snoU13.27-201ENST00000459278 104 ntBASIC0.87□□□□□ -2.27
TPM3P06753 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.87□□□□□ -2.27
TPM3P06753 ATP5EP1-201ENST00000510257 156 ntBASIC0.87□□□□□ -2.27
TPM3P06753 MTND4LP25-201ENST00000570218 163 ntBASIC0.87□□□□□ -2.27
TPM3P06753 DEFB131E-202ENST00000602581 683 ntBASIC0.87□□□□□ -2.27
TPM3P06753 AC008945.2-201ENST00000606056 604 ntBASIC0.87□□□□□ -2.27
TPM3P06753 MIR3976-201ENST00000606807 139 ntBASIC0.87□□□□□ -2.27
TPM3P06753 AL451064.1-201ENST00000607718 471 ntBASIC0.87□□□□□ -2.27
TPM3P06753 AC083806.3-201ENST00000614016 455 ntBASIC0.87□□□□□ -2.27
TPM3P06753 AC131159.1-201ENST00000621854 213 ntBASIC0.87□□□□□ -2.27
TPM3P06753 AC008163.1-202ENST00000636004 2889 ntBASIC0.87□□□□□ -2.27
TPM3P06753 RNU6-78P-201ENST00000362897 107 ntBASIC0.86□□□□□ -2.27
TPM3P06753 RNU6-1285P-201ENST00000363480 105 ntBASIC0.86□□□□□ -2.27
TPM3P06753 AC006461.1-201ENST00000412637 326 ntBASIC0.86□□□□□ -2.27
TPM3P06753 AL606490.4-201ENST00000423117 127 ntBASIC0.86□□□□□ -2.27
TPM3P06753 HSPE1P13-201ENST00000451143 297 ntBASIC0.86□□□□□ -2.27
TPM3P06753 COX6CP14-201ENST00000469580 174 ntBASIC0.86□□□□□ -2.27
TPM3P06753 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.86□□□□□ -2.27
TPM3P06753 AC022447.4-201ENST00000504053 364 ntBASIC0.86□□□□□ -2.27
TPM3P06753 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.86□□□□□ -2.27
TPM3P06753 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.86□□□□□ -2.27
TPM3P06753 ACA64.5-201ENST00000516207 127 ntBASIC0.86□□□□□ -2.27
TPM3P06753 RN7SKP219-201ENST00000516825 296 ntBASIC0.86□□□□□ -2.27
TPM3P06753 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.86□□□□□ -2.27
TPM3P06753 RNU6-1192P-201ENST00000612197 107 ntBASIC0.86□□□□□ -2.27
TPM3P06753 RNU6-489P-201ENST00000618289 107 ntBASIC0.86□□□□□ -2.27
TPM3P06753 AC026585.1-201ENST00000619582 524 ntBASIC0.86□□□□□ -2.27
TPM3P06753 AL138955.1-201ENST00000622881 1040 ntBASIC0.86□□□□□ -2.27
TPM3P06753 AL356596.1-201ENST00000624230 379 ntBASIC0.86□□□□□ -2.27
TPM3P06753 AL159152.1-201ENST00000635019 2587 ntBASIC0.85□□□□□ -2.27
TPM3P06753 Y_RNA.46-201ENST00000362695 102 ntBASIC0.85□□□□□ -2.27
TPM3P06753 MIR578-201ENST00000384828 96 ntBASIC0.85□□□□□ -2.27
TPM3P06753 MIR544A-201ENST00000384855 91 ntBASIC0.85□□□□□ -2.27
TPM3P06753 RNU11-5P-201ENST00000391216 129 ntBASIC0.85□□□□□ -2.27
TPM3P06753 ERHP2-201ENST00000402323 299 ntBASIC0.85□□□□□ -2.27
TPM3P06753 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.85□□□□□ -2.27
TPM3P06753 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.85□□□□□ -2.27
TPM3P06753 MTCO3P28-201ENST00000513351 515 ntBASIC0.85□□□□□ -2.27
TPM3P06753 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.85□□□□□ -2.27
TPM3P06753 AC008088.1-201ENST00000580993 280 ntBASIC0.85□□□□□ -2.27
TPM3P06753 BNIP3P8-201ENST00000597863 560 ntBASIC0.85□□□□□ -2.27
TPM3P06753 AC080078.3-201ENST00000605407 463 ntBASIC0.85□□□□□ -2.27
TPM3P06753 AC091895.1-201ENST00000624494 256 ntBASIC0.85□□□□□ -2.27
TPM3P06753 RNY4P24-201ENST00000362735 96 ntBASIC0.84□□□□□ -2.27
TPM3P06753 RNU6-438P-201ENST00000365561 103 ntBASIC0.84□□□□□ -2.27
TPM3P06753 AL356776.1-201ENST00000406574 447 ntBASIC0.84□□□□□ -2.27
TPM3P06753 AL031779.1-201ENST00000415663 330 ntBASIC0.84□□□□□ -2.27
TPM3P06753 MTCO1P21-201ENST00000416634 589 ntBASIC0.84□□□□□ -2.27
TPM3P06753 ARL5AP1-201ENST00000418991 388 ntBASIC0.84□□□□□ -2.27
TPM3P06753 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.84□□□□□ -2.27
TPM3P06753 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.84□□□□□ -2.27
TPM3P06753 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.84□□□□□ -2.27
TPM3P06753 MTND3P5-201ENST00000512798 333 ntBASIC0.84□□□□□ -2.27
TPM3P06753 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.84□□□□□ -2.27
TPM3P06753 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.84□□□□□ -2.27
TPM3P06753 AC015712.3-201ENST00000559380 164 ntBASIC0.84□□□□□ -2.27
TPM3P06753 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.84□□□□□ -2.27
TPM3P06753 AC107304.1-201ENST00000604229 296 ntBASIC0.84□□□□□ -2.27
TPM3P06753 AC104073.3-201ENST00000610942 955 ntBASIC0.84□□□□□ -2.27
TPM3P06753 AC092106.3-201ENST00000611308 722 ntBASIC0.84□□□□□ -2.27
TPM3P06753 AC040896.1-201ENST00000613819 479 ntBASIC0.84□□□□□ -2.27
TPM3P06753 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.84□□□□□ -2.27
TPM3P06753 AC068647.2-201ENST00000637380 353 ntBASIC0.84□□□□□ -2.27
TPM3P06753 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.28
TPM3P06753 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms