Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDKL5O76039 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.41□□□□□ -1.86
CDKL5O76039 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
CDKL5O76039 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.4□□□□□ -1.86
CDKL5O76039 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDKL5O76039 SNORD14.1-201ENST00000365609 90 ntBASIC3.4□□□□□ -1.87
CDKL5O76039 MIR521-1-201ENST00000384902 87 ntBASIC3.4□□□□□ -1.87
CDKL5O76039 AC007560.1-201ENST00000426912 237 ntBASIC3.4□□□□□ -1.87
CDKL5O76039 RPS15AP10-201ENST00000432472 382 ntBASIC3.4□□□□□ -1.87
CDKL5O76039 HIGD1AP2-201ENST00000446367 280 ntBASIC3.4□□□□□ -1.87
CDKL5O76039 AC133134.1-201ENST00000466800 359 ntBASIC3.4□□□□□ -1.87
CDKL5O76039 RPL22P13-201ENST00000493291 347 ntBASIC3.4□□□□□ -1.87
CDKL5O76039 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.4□□□□□ -1.87
CDKL5O76039 Y_RNA.715-201ENST00000517082 110 ntBASIC3.4□□□□□ -1.87
CDKL5O76039 RNU6-794P-201ENST00000517261 64 ntBASIC3.4□□□□□ -1.87
CDKL5O76039 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.4□□□□□ -1.87
CDKL5O76039 AC096644.4-201ENST00000563417 2912 ntBASIC3.4□□□□□ -1.87
CDKL5O76039 AC008121.1-201ENST00000603244 268 ntBASIC3.4□□□□□ -1.87
CDKL5O76039 AP000787.2-201ENST00000604432 568 ntBASIC3.4□□□□□ -1.87
CDKL5O76039 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.4□□□□□ -1.87
CDKL5O76039 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.4□□□□□ -1.87
CDKL5O76039 MIR3651-201ENST00000630427 90 ntBASIC3.4□□□□□ -1.87
CDKL5O76039 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.4□□□□□ -1.87
CDKL5O76039 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDKL5O76039 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDKL5O76039 AC073346.2-201ENST00000624724 2058 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.39□□□□□ -1.87
CDKL5O76039 Y_RNA.380-201ENST00000365663 111 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CDKL5O76039 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 MIR1252-201ENST00000408861 65 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 BMS1P22-201ENST00000414726 313 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 AC022018.1-201ENST00000430685 241 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.39□□□□□ -1.87
CDKL5O76039 OR2AQ1P-201ENST00000451972 200 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 AC092798.1-201ENST00000458542 409 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 RNU7-169P-201ENST00000459456 61 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 AC083906.5-201ENST00000503722 328 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 Y_RNA.668-201ENST00000516233 93 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 SNORA40.14-201ENST00000516543 86 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 RNU6-572P-201ENST00000516724 80 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.39□□□□□ -1.87
CDKL5O76039 AC040926.1-201ENST00000530195 238 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 TRAV28-201ENST00000557548 323 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 MYL12BP1-201ENST00000569826 507 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 AC006600.1-201ENST00000572529 153 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 MIR5195-201ENST00000583555 115 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 Z98751.3-201ENST00000604447 521 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 AC100812.1-201ENST00000607622 580 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.39□□□□□ -1.87
CDKL5O76039 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.39□□□□□ -1.87
CDKL5O76039 AC108206.1-201ENST00000570186 4159 ntBASIC3.39□□□□□ -1.87
CDKL5O76039 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CDKL5O76039 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.38□□□□□ -1.87
CDKL5O76039 RNU6-428P-201ENST00000362942 107 ntBASIC3.38□□□□□ -1.87
CDKL5O76039 Y_RNA.396-201ENST00000383949 103 ntBASIC3.38□□□□□ -1.87
CDKL5O76039 RNU6-784P-201ENST00000384330 106 ntBASIC3.38□□□□□ -1.87
CDKL5O76039 MT-TR-201ENST00000387439 65 ntBASIC3.38□□□□□ -1.87
CDKL5O76039 AL451074.5-201ENST00000415894 435 ntBASIC3.38□□□□□ -1.87
CDKL5O76039 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL5O76039 PCNPP5-201ENST00000452246 481 ntBASIC3.38□□□□□ -1.87
CDKL5O76039 RNA5SP291-201ENST00000517222 105 ntBASIC3.38□□□□□ -1.87
CDKL5O76039 RNU6-711P-201ENST00000517255 106 ntBASIC3.38□□□□□ -1.87
CDKL5O76039 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL5O76039 AC004584.2-201ENST00000570407 410 ntBASIC3.38□□□□□ -1.87
CDKL5O76039 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL5O76039 AC016727.2-201ENST00000603988 621 ntBASIC3.38□□□□□ -1.87
CDKL5O76039 AC136601.2-201ENST00000604356 474 ntBASIC3.38□□□□□ -1.87
CDKL5O76039 AC004805.2-201ENST00000605382 482 ntBASIC3.38□□□□□ -1.87
CDKL5O76039 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.38□□□□□ -1.87
CDKL5O76039 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.38□□□□□ -1.87
CDKL5O76039 AL138825.1-201ENST00000618587 192 ntBASIC3.38□□□□□ -1.87
CDKL5O76039 U2.1-201ENST00000618978 145 ntBASIC3.38□□□□□ -1.87
CDKL5O76039 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.38□□□□□ -1.87
CDKL5O76039 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDKL5O76039 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDKL5O76039 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.38□□□□□ -1.87
CDKL5O76039 AC007785.2-201ENST00000598627 1916 ntBASIC3.38□□□□□ -1.87
CDKL5O76039 AL359693.1-201ENST00000614959 2407 ntBASIC3.38□□□□□ -1.87
CDKL5O76039 AC008568.2-201ENST00000623862 2313 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.37□□□□□ -1.87
CDKL5O76039 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDKL5O76039 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDKL5O76039 RNU1-35P-201ENST00000362782 153 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 MIR512-1-201ENST00000384913 84 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 MIR23A-201ENST00000385245 73 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 MIR325-201ENST00000385260 98 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CDKL5O76039 RPL21P1-201ENST00000399532 476 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 RNU2-68P-201ENST00000410878 191 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 RPL21P66-201ENST00000426566 466 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 TOMM20P4-201ENST00000427861 435 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 AL590383.1-201ENST00000428602 75 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.37□□□□□ -1.87
CDKL5O76039 DYNLT3P2-201ENST00000442517 295 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 AL078601.1-201ENST00000444542 271 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 AC009237.8-201ENST00000445492 379 ntBASIC3.37□□□□□ -1.87
CDKL5O76039 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDKL5O76039 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms