Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CLPXO76031 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CLPXO76031 SNORA62.1-201ENST00000364287 154 ntBASIC1.56□□□□□ -2.16
CLPXO76031 RNU6-108P-201ENST00000365558 107 ntBASIC1.56□□□□□ -2.16
CLPXO76031 MIR454-201ENST00000390180 115 ntBASIC1.56□□□□□ -2.16
CLPXO76031 SNORA40.3-201ENST00000390964 122 ntBASIC1.56□□□□□ -2.16
CLPXO76031 Y_RNA.597-201ENST00000410463 100 ntBASIC1.56□□□□□ -2.16
CLPXO76031 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.56□□□□□ -2.16
CLPXO76031 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.56□□□□□ -2.16
CLPXO76031 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.56□□□□□ -2.16
CLPXO76031 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.56□□□□□ -2.16
CLPXO76031 AL122001.1-201ENST00000457027 370 ntBASIC1.56□□□□□ -2.16
CLPXO76031 RNU7-182P-201ENST00000459009 62 ntBASIC1.56□□□□□ -2.16
CLPXO76031 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.56□□□□□ -2.16
CLPXO76031 AP005435.4-201ENST00000529514 284 ntBASIC1.56□□□□□ -2.16
CLPXO76031 AC110588.1-201ENST00000559699 137 ntBASIC1.56□□□□□ -2.16
CLPXO76031 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.56□□□□□ -2.16
CLPXO76031 AC063943.3-201ENST00000615562 356 ntBASIC1.56□□□□□ -2.16
CLPXO76031 AC011155.2-201ENST00000623202 216 ntBASIC1.56□□□□□ -2.16
CLPXO76031 AC097372.5-201ENST00000623665 376 ntBASIC1.56□□□□□ -2.16
CLPXO76031 MIR1248-201ENST00000629190 106 ntBASIC1.56□□□□□ -2.16
CLPXO76031 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CLPXO76031 ZNF680P1-201ENST00000436625 1469 ntBASIC1.56□□□□□ -2.16
CLPXO76031 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.55□□□□□ -2.16
CLPXO76031 MIR126-201ENST00000362291 85 ntBASIC1.55□□□□□ -2.16
CLPXO76031 Y_RNA.99-201ENST00000363138 105 ntBASIC1.55□□□□□ -2.16
CLPXO76031 RNU6-743P-201ENST00000364151 106 ntBASIC1.55□□□□□ -2.16
CLPXO76031 RNU6-195P-201ENST00000411352 109 ntBASIC1.55□□□□□ -2.16
CLPXO76031 MTND3P17-201ENST00000416968 344 ntBASIC1.55□□□□□ -2.16
CLPXO76031 ISCA1P6-201ENST00000427740 390 ntBASIC1.55□□□□□ -2.16
CLPXO76031 MTND2P4-201ENST00000445034 1004 ntBASIC1.55□□□□□ -2.16
CLPXO76031 AL360221.1-201ENST00000445989 335 ntBASIC1.55□□□□□ -2.16
CLPXO76031 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.55□□□□□ -2.16
CLPXO76031 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.55□□□□□ -2.16
CLPXO76031 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.55□□□□□ -2.16
CLPXO76031 AC009646.1-201ENST00000510455 318 ntBASIC1.55□□□□□ -2.16
CLPXO76031 RNU6-970P-201ENST00000516312 107 ntBASIC1.55□□□□□ -2.16
CLPXO76031 SNORD27.1-201ENST00000516319 72 ntBASIC1.55□□□□□ -2.16
CLPXO76031 AP005660.1-201ENST00000522972 293 ntBASIC1.55□□□□□ -2.16
CLPXO76031 AP001893.2-201ENST00000526949 202 ntBASIC1.55□□□□□ -2.16
CLPXO76031 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.55□□□□□ -2.16
CLPXO76031 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.55□□□□□ -2.16
CLPXO76031 AC104581.2-201ENST00000572227 430 ntBASIC1.55□□□□□ -2.16
CLPXO76031 AC137800.2-201ENST00000574375 120 ntBASIC1.55□□□□□ -2.16
CLPXO76031 AC010900.2-201ENST00000604508 210 ntBASIC1.55□□□□□ -2.16
CLPXO76031 MIR98-201ENST00000606724 119 ntBASIC1.55□□□□□ -2.16
CLPXO76031 AL022345.1-201ENST00000607292 135 ntBASIC1.55□□□□□ -2.16
CLPXO76031 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
CLPXO76031 uc_338.11-201ENST00000619132 160 ntBASIC1.55□□□□□ -2.16
CLPXO76031 SEPT14P19-203ENST00000633205 211 ntBASIC1.55□□□□□ -2.16
CLPXO76031 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CLPXO76031 RNU1-58P-201ENST00000362413 163 ntBASIC1.54□□□□□ -2.16
CLPXO76031 Y_RNA.140-201ENST00000363474 103 ntBASIC1.54□□□□□ -2.16
CLPXO76031 RNU6-105P-201ENST00000363909 104 ntBASIC1.54□□□□□ -2.16
CLPXO76031 Y_RNA.338-201ENST00000365320 114 ntBASIC1.54□□□□□ -2.16
CLPXO76031 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CLPXO76031 MIR544A-201ENST00000384855 91 ntBASIC1.54□□□□□ -2.16
CLPXO76031 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.54□□□□□ -2.16
CLPXO76031 RNA5SP213-201ENST00000391031 106 ntBASIC1.54□□□□□ -2.16
CLPXO76031 SNORA40.18-201ENST00000391200 128 ntBASIC1.54□□□□□ -2.16
CLPXO76031 RNU4-46P-201ENST00000410818 138 ntBASIC1.54□□□□□ -2.16
CLPXO76031 RNA5SP501-201ENST00000410990 112 ntBASIC1.54□□□□□ -2.16
CLPXO76031 CYCSP46-201ENST00000423569 204 ntBASIC1.54□□□□□ -2.16
CLPXO76031 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.54□□□□□ -2.16
CLPXO76031 KATNBL1P3-201ENST00000443475 909 ntBASIC1.54□□□□□ -2.16
CLPXO76031 AC079448.1-201ENST00000449377 373 ntBASIC1.54□□□□□ -2.16
CLPXO76031 GAPDHP17-201ENST00000449858 1001 ntBASIC1.54□□□□□ -2.16
CLPXO76031 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.54□□□□□ -2.16
CLPXO76031 AC096745.1-201ENST00000509945 370 ntBASIC1.54□□□□□ -2.16
CLPXO76031 RNA5SP503-201ENST00000517047 117 ntBASIC1.54□□□□□ -2.16
CLPXO76031 AC109479.2-201ENST00000517842 174 ntBASIC1.54□□□□□ -2.16
CLPXO76031 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.54□□□□□ -2.16
CLPXO76031 AL356057.1-201ENST00000533798 831 ntBASIC1.54□□□□□ -2.16
CLPXO76031 AK6P1-201ENST00000540219 478 ntBASIC1.54□□□□□ -2.16
CLPXO76031 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.54□□□□□ -2.16
CLPXO76031 AC245014.2-201ENST00000603689 287 ntBASIC1.54□□□□□ -2.16
CLPXO76031 AC246785.4-201ENST00000605374 287 ntBASIC1.54□□□□□ -2.16
CLPXO76031 AC006566.1-201ENST00000608943 513 ntBASIC1.54□□□□□ -2.16
CLPXO76031 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.54□□□□□ -2.16
CLPXO76031 AC023510.2-201ENST00000622162 746 ntBASIC1.54□□□□□ -2.16
CLPXO76031 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.54□□□□□ -2.16
CLPXO76031 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.54□□□□□ -2.16
CLPXO76031 Y_RNA.324-201ENST00000365165 102 ntBASIC1.53□□□□□ -2.16
CLPXO76031 RNU6-715P-201ENST00000365204 103 ntBASIC1.53□□□□□ -2.16
CLPXO76031 RNU6-74P-201ENST00000384235 107 ntBASIC1.53□□□□□ -2.16
CLPXO76031 RPL31P35-201ENST00000431058 377 ntBASIC1.53□□□□□ -2.16
CLPXO76031 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.53□□□□□ -2.16
CLPXO76031 AL596276.1-201ENST00000434465 418 ntBASIC1.53□□□□□ -2.16
CLPXO76031 AC022364.2-201ENST00000457963 554 ntBASIC1.53□□□□□ -2.16
CLPXO76031 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.53□□□□□ -2.16
CLPXO76031 AC079140.5-201ENST00000507882 310 ntBASIC1.53□□□□□ -2.16
CLPXO76031 AC093259.1-201ENST00000509755 300 ntBASIC1.53□□□□□ -2.16
CLPXO76031 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.53□□□□□ -2.16
CLPXO76031 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.53□□□□□ -2.16
CLPXO76031 RNU5F-2P-201ENST00000516066 82 ntBASIC1.53□□□□□ -2.16
CLPXO76031 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.53□□□□□ -2.16
CLPXO76031 RNU6-1178P-201ENST00000516674 107 ntBASIC1.53□□□□□ -2.16
CLPXO76031 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.53□□□□□ -2.16
CLPXO76031 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.53□□□□□ -2.16
CLPXO76031 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms