Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AC007969.2-201ENST00000441891 191 ntBASIC1.93□□□□□ -2.1
TRIM3O75382 AC073415.1-201ENST00000449240 153 ntBASIC1.93□□□□□ -2.1
TRIM3O75382 AC117503.1-201ENST00000472241 394 ntBASIC1.93□□□□□ -2.1
TRIM3O75382 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.93□□□□□ -2.1
TRIM3O75382 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.93□□□□□ -2.1
TRIM3O75382 HMGB1P29-201ENST00000505659 499 ntBASIC1.93□□□□□ -2.1
TRIM3O75382 AC091133.4-201ENST00000511142 308 ntBASIC1.93□□□□□ -2.1
TRIM3O75382 RNU6-377P-201ENST00000515965 102 ntBASIC1.93□□□□□ -2.1
TRIM3O75382 RNA5SP137-201ENST00000516833 135 ntBASIC1.93□□□□□ -2.1
TRIM3O75382 RNU6-586P-201ENST00000517265 104 ntBASIC1.93□□□□□ -2.1
TRIM3O75382 HSPE1P18-201ENST00000517602 280 ntBASIC1.93□□□□□ -2.1
TRIM3O75382 AL137161.1-201ENST00000532231 390 ntBASIC1.93□□□□□ -2.1
TRIM3O75382 AC233702.2-202ENST00000562547 291 ntBASIC1.93□□□□□ -2.1
TRIM3O75382 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.93□□□□□ -2.1
TRIM3O75382 MIR4299-201ENST00000577899 72 ntBASIC1.93□□□□□ -2.1
TRIM3O75382 NBR2-204ENST00000587322 63 ntBASIC1.93□□□□□ -2.1
TRIM3O75382 AC012507.3-201ENST00000603556 477 ntBASIC1.93□□□□□ -2.1
TRIM3O75382 AC008121.3-201ENST00000618726 433 ntBASIC1.93□□□□□ -2.1
TRIM3O75382 AC005609.4-201ENST00000625071 447 ntBASIC1.93□□□□□ -2.1
TRIM3O75382 AL354685.2-201ENST00000448218 1447 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TRIM3O75382 SUMO2P12-201ENST00000405924 140 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 RNU4-26P-201ENST00000410270 107 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 BTF3L4P1-201ENST00000413813 468 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.92□□□□□ -2.1
TRIM3O75382 AL606489.2-201ENST00000433886 234 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.92□□□□□ -2.1
TRIM3O75382 RPL39P29-201ENST00000447779 157 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 RPL23AP3-201ENST00000453844 468 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 AL122001.1-201ENST00000457027 370 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 AL163973.1-201ENST00000484753 577 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 RN7SL274P-201ENST00000492268 272 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.92□□□□□ -2.1
TRIM3O75382 AC093534.1-201ENST00000504977 132 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 RNU6-405P-201ENST00000516637 110 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 SNORA25.17-201ENST00000517184 124 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TRIM3O75382 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.92□□□□□ -2.1
TRIM3O75382 AP001893.2-201ENST00000526949 202 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.92□□□□□ -2.1
TRIM3O75382 AC023050.3-201ENST00000541142 333 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 IMMP1LP2-201ENST00000552954 492 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 AC004223.2-201ENST00000590309 544 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 AC087683.1-201ENST00000591187 441 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 AC091805.2-201ENST00000603848 235 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 Z99129.1-201ENST00000612510 255 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 AC007792.1-201ENST00000623023 402 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 AC139792.3-201ENST00000623525 224 ntBASIC1.92□□□□□ -2.1
TRIM3O75382 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.92□□□□□ -2.1
TRIM3O75382 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.92□□□□□ -2.1
TRIM3O75382 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TRIM3O75382 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
TRIM3O75382 AC002543.1-201ENST00000299783 1954 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 snoU2_19.1-201ENST00000362361 80 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 RNU6-428P-201ENST00000362942 107 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 RNU6-105P-201ENST00000363909 104 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 SNORA25B-201ENST00000365507 128 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 RNU6-1042P-201ENST00000384204 107 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 RNU6-1274P-201ENST00000384557 107 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 MIR561-201ENST00000385216 97 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
TRIM3O75382 RNU6-293P-201ENST00000411259 106 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.91□□□□□ -2.1
TRIM3O75382 SNORD56-201ENST00000413522 71 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.91□□□□□ -2.1
TRIM3O75382 Z83846.1-201ENST00000446798 265 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 MTND1P29-201ENST00000448112 647 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 AL031274.1-201ENST00000450334 232 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 AL353752.1-201ENST00000454946 260 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 snoU13.15-201ENST00000459407 104 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 SNRPGP7-201ENST00000469016 106 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 AC018868.1-201ENST00000491307 315 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 HMGB1P35-201ENST00000503360 598 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 SNORA48.11-201ENST00000517015 89 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.91□□□□□ -2.1
TRIM3O75382 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.91□□□□□ -2.1
TRIM3O75382 AC243960.4-201ENST00000600532 288 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 AC078795.2-201ENST00000602835 1252 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 AL109918.3-201ENST00000603072 338 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 AC005034.5-201ENST00000604219 466 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 AL670379.2-201ENST00000604983 252 ntBASIC1.91□□□□□ -2.1
TRIM3O75382 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.91□□□□□ -2.1
TRIM3O75382 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
TRIM3O75382 ZNF355P-201ENST00000427301 3216 ntBASIC1.9□□□□□ -2.11
TRIM3O75382 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.9□□□□□ -2.11
TRIM3O75382 SNORD114-1-201ENST00000362705 72 ntBASIC1.9□□□□□ -2.11
TRIM3O75382 RNU6-1210P-201ENST00000363775 107 ntBASIC1.9□□□□□ -2.11
TRIM3O75382 RNU6-266P-201ENST00000364225 107 ntBASIC1.9□□□□□ -2.11
TRIM3O75382 Y_RNA.480-201ENST00000384364 102 ntBASIC1.9□□□□□ -2.11
TRIM3O75382 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
TRIM3O75382 RNU2-66P-201ENST00000410650 161 ntBASIC1.9□□□□□ -2.11
TRIM3O75382 RNA5SP450-201ENST00000411206 102 ntBASIC1.9□□□□□ -2.11
TRIM3O75382 AL030996.1-201ENST00000411430 235 ntBASIC1.9□□□□□ -2.11
TRIM3O75382 AL663109.1-201ENST00000411498 844 ntBASIC1.9□□□□□ -2.11
TRIM3O75382 AL445646.1-201ENST00000431784 216 ntBASIC1.9□□□□□ -2.11
TRIM3O75382 AC010095.1-201ENST00000443543 144 ntBASIC1.9□□□□□ -2.11
TRIM3O75382 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.9□□□□□ -2.11
TRIM3O75382 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.9□□□□□ -2.11
TRIM3O75382 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.9□□□□□ -2.11
TRIM3O75382 RNU7-180P-201ENST00000459240 63 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 205.3 ms