Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC128713.1-201ENST00000471495 306 ntBASIC2.73□□□□□ -1.97
LDB3O75112 FO393415.2-201ENST00000480085 343 ntBASIC2.73□□□□□ -1.97
LDB3O75112 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.73□□□□□ -1.97
LDB3O75112 RAC1P5-201ENST00000512182 576 ntBASIC2.73□□□□□ -1.97
LDB3O75112 RNU6-1183P-201ENST00000517054 60 ntBASIC2.73□□□□□ -1.97
LDB3O75112 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.73□□□□□ -1.97
LDB3O75112 CBX3P8-201ENST00000532412 525 ntBASIC2.73□□□□□ -1.97
LDB3O75112 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.73□□□□□ -1.97
LDB3O75112 TRAV32-201ENST00000553993 340 ntBASIC2.73□□□□□ -1.97
LDB3O75112 LINC00933-203ENST00000559812 219 ntBASIC2.73□□□□□ -1.97
LDB3O75112 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.73□□□□□ -1.97
LDB3O75112 CYCSP39-201ENST00000565821 309 ntBASIC2.73□□□□□ -1.97
LDB3O75112 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.73□□□□□ -1.97
LDB3O75112 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.73□□□□□ -1.97
LDB3O75112 OR1M4P-201ENST00000589199 287 ntBASIC2.73□□□□□ -1.97
LDB3O75112 AL451007.1-201ENST00000595491 289 ntBASIC2.73□□□□□ -1.97
LDB3O75112 AL160281.1-201ENST00000605307 311 ntBASIC2.73□□□□□ -1.97
LDB3O75112 AC005000.2-201ENST00000605468 310 ntBASIC2.73□□□□□ -1.97
LDB3O75112 MIR3976-201ENST00000606807 139 ntBASIC2.73□□□□□ -1.97
LDB3O75112 AC138305.3-201ENST00000624988 240 ntBASIC2.73□□□□□ -1.97
LDB3O75112 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.73□□□□□ -1.97
LDB3O75112 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LDB3O75112 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
LDB3O75112 AC092435.3-201ENST00000565538 3654 ntBASIC2.73□□□□□ -1.97
LDB3O75112 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.73□□□□□ -1.97
LDB3O75112 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LDB3O75112 AC008264.2-201ENST00000610193 3731 ntBASIC2.72□□□□□ -1.97
LDB3O75112 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
LDB3O75112 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
LDB3O75112 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
LDB3O75112 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LDB3O75112 RNU1-105P-201ENST00000363470 161 ntBASIC2.72□□□□□ -1.97
LDB3O75112 Y_RNA.455-201ENST00000384230 98 ntBASIC2.72□□□□□ -1.97
LDB3O75112 MT-TR-201ENST00000387439 65 ntBASIC2.72□□□□□ -1.97
LDB3O75112 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.72□□□□□ -1.97
LDB3O75112 RNU6-325P-201ENST00000411132 105 ntBASIC2.72□□□□□ -1.97
LDB3O75112 AL030996.1-201ENST00000411430 235 ntBASIC2.72□□□□□ -1.97
LDB3O75112 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.72□□□□□ -1.97
LDB3O75112 RPL21P2-201ENST00000440049 481 ntBASIC2.72□□□□□ -1.97
LDB3O75112 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.72□□□□□ -1.97
LDB3O75112 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.72□□□□□ -1.97
LDB3O75112 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.72□□□□□ -1.97
LDB3O75112 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.72□□□□□ -1.97
LDB3O75112 AC010655.3-201ENST00000478818 450 ntBASIC2.72□□□□□ -1.97
LDB3O75112 AP004217.1-201ENST00000480579 346 ntBASIC2.72□□□□□ -1.97
LDB3O75112 RN7SL283P-201ENST00000489055 303 ntBASIC2.72□□□□□ -1.97
LDB3O75112 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.72□□□□□ -1.97
LDB3O75112 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.72□□□□□ -1.97
LDB3O75112 AC110588.1-201ENST00000559699 137 ntBASIC2.72□□□□□ -1.97
LDB3O75112 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.72□□□□□ -1.97
LDB3O75112 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.72□□□□□ -1.97
LDB3O75112 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.72□□□□□ -1.97
LDB3O75112 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
LDB3O75112 AC099654.7-201ENST00000635788 2127 ntBASIC2.72□□□□□ -1.97
LDB3O75112 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.72□□□□□ -1.97
LDB3O75112 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LDB3O75112 AC005592.1-201ENST00000566527 1640 ntBASIC2.71□□□□□ -1.97
LDB3O75112 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-37P-201ENST00000362692 107 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-238P-201ENST00000363313 106 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-11P-201ENST00000364234 107 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-7-201ENST00000364784 107 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-8-201ENST00000365467 107 ntBASIC2.71□□□□□ -1.98
LDB3O75112 AC117470.1-201ENST00000381974 330 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-25P-201ENST00000383873 107 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-1-201ENST00000383898 107 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-48P-201ENST00000384161 107 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-36P-201ENST00000384172 107 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-4P-201ENST00000384205 107 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-5P-201ENST00000384238 107 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-3P-201ENST00000384314 107 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-16P-201ENST00000384385 107 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-15P-201ENST00000384534 107 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-2-201ENST00000384627 107 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-29P-201ENST00000384637 107 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-9-201ENST00000384776 107 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-33P-201ENST00000384793 107 ntBASIC2.71□□□□□ -1.98
LDB3O75112 UBA52P6-201ENST00000399822 382 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-174P-201ENST00000410406 106 ntBASIC2.71□□□□□ -1.98
LDB3O75112 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
LDB3O75112 PGBD4P6-201ENST00000421501 610 ntBASIC2.71□□□□□ -1.98
LDB3O75112 AL139132.1-201ENST00000431587 344 ntBASIC2.71□□□□□ -1.98
LDB3O75112 AC009969.1-201ENST00000438726 172 ntBASIC2.71□□□□□ -1.98
LDB3O75112 AL731563.1-201ENST00000442202 214 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RPS27AP10-201ENST00000496103 208 ntBASIC2.71□□□□□ -1.98
LDB3O75112 AC083906.5-201ENST00000503722 328 ntBASIC2.71□□□□□ -1.98
LDB3O75112 AC022447.4-201ENST00000504053 364 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-635P-201ENST00000516651 102 ntBASIC2.71□□□□□ -1.98
LDB3O75112 SNORD116.3-201ENST00000517176 78 ntBASIC2.71□□□□□ -1.98
LDB3O75112 AC107016.2-201ENST00000547968 190 ntBASIC2.71□□□□□ -1.98
LDB3O75112 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.71□□□□□ -1.98
LDB3O75112 HMGN2P15-201ENST00000585707 270 ntBASIC2.71□□□□□ -1.98
LDB3O75112 AL158827.2-201ENST00000602494 330 ntBASIC2.71□□□□□ -1.98
LDB3O75112 7SK.7-201ENST00000603504 247 ntBASIC2.71□□□□□ -1.98
LDB3O75112 MTND4LP5-201ENST00000605152 292 ntBASIC2.71□□□□□ -1.98
LDB3O75112 RNU6-6P-201ENST00000606623 107 ntBASIC2.71□□□□□ -1.98
LDB3O75112 Z69720.2-201ENST00000624755 279 ntBASIC2.71□□□□□ -1.98
LDB3O75112 AL691447.3-201ENST00000635020 330 ntBASIC2.71□□□□□ -1.98
LDB3O75112 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
LDB3O75112 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms