Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 U2.10-201ENST00000620268 191 ntBASIC2.04□□□□□ -2.08
SDC3O75056 AL354685.2-201ENST00000448218 1447 ntBASIC2.03□□□□□ -2.08
SDC3O75056 RNU6-1159P-201ENST00000362933 107 ntBASIC2.03□□□□□ -2.08
SDC3O75056 RNU6-529P-201ENST00000363383 104 ntBASIC2.03□□□□□ -2.08
SDC3O75056 Y_RNA.194-201ENST00000363985 102 ntBASIC2.03□□□□□ -2.08
SDC3O75056 RNU4-24P-201ENST00000364565 139 ntBASIC2.03□□□□□ -2.08
SDC3O75056 Y_RNA.255-201ENST00000364581 97 ntBASIC2.03□□□□□ -2.08
SDC3O75056 SNORA16B-201ENST00000364674 135 ntBASIC2.03□□□□□ -2.08
SDC3O75056 SNORA25B-201ENST00000365507 128 ntBASIC2.03□□□□□ -2.08
SDC3O75056 U8.13-201ENST00000390842 128 ntBASIC2.03□□□□□ -2.08
SDC3O75056 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.03□□□□□ -2.08
SDC3O75056 HMGB3P2-201ENST00000411913 584 ntBASIC2.03□□□□□ -2.08
SDC3O75056 AL139156.1-201ENST00000412785 841 ntBASIC2.03□□□□□ -2.08
SDC3O75056 MTCYBP8-201ENST00000422855 651 ntBASIC2.03□□□□□ -2.08
SDC3O75056 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.03□□□□□ -2.08
SDC3O75056 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.03□□□□□ -2.08
SDC3O75056 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.03□□□□□ -2.08
SDC3O75056 RPL7P54-201ENST00000438336 674 ntBASIC2.03□□□□□ -2.08
SDC3O75056 AL603825.1-201ENST00000438481 80 ntBASIC2.03□□□□□ -2.08
SDC3O75056 HMGB1P18-201ENST00000438801 619 ntBASIC2.03□□□□□ -2.08
SDC3O75056 AC007969.2-201ENST00000441891 191 ntBASIC2.03□□□□□ -2.08
SDC3O75056 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.03□□□□□ -2.08
SDC3O75056 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.03□□□□□ -2.08
SDC3O75056 PSPHP1-201ENST00000450062 261 ntBASIC2.03□□□□□ -2.08
SDC3O75056 RNU7-167P-201ENST00000459160 62 ntBASIC2.03□□□□□ -2.08
SDC3O75056 AC107032.1-201ENST00000485945 480 ntBASIC2.03□□□□□ -2.08
SDC3O75056 RNU6-991P-201ENST00000516168 107 ntBASIC2.03□□□□□ -2.08
SDC3O75056 SNORA48.11-201ENST00000517015 89 ntBASIC2.03□□□□□ -2.08
SDC3O75056 SNORA31.25-201ENST00000517242 134 ntBASIC2.03□□□□□ -2.08
SDC3O75056 RNU6-586P-201ENST00000517265 104 ntBASIC2.03□□□□□ -2.08
SDC3O75056 AC109479.2-201ENST00000517842 174 ntBASIC2.03□□□□□ -2.08
SDC3O75056 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SDC3O75056 COPS8P3-201ENST00000526024 482 ntBASIC2.03□□□□□ -2.08
SDC3O75056 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.03□□□□□ -2.08
SDC3O75056 AC104383.1-201ENST00000530297 370 ntBASIC2.03□□□□□ -2.08
SDC3O75056 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.03□□□□□ -2.08
SDC3O75056 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.03□□□□□ -2.08
SDC3O75056 AC004223.2-201ENST00000590309 544 ntBASIC2.03□□□□□ -2.08
SDC3O75056 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.03□□□□□ -2.08
SDC3O75056 AC011494.1-201ENST00000596454 237 ntBASIC2.03□□□□□ -2.08
SDC3O75056 AC022202.1-201ENST00000613515 211 ntBASIC2.03□□□□□ -2.08
SDC3O75056 AL354950.2-201ENST00000617939 290 ntBASIC2.03□□□□□ -2.08
SDC3O75056 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.03□□□□□ -2.08
SDC3O75056 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SDC3O75056 ZNF72P-201ENST00000425869 1908 ntBASIC2.03□□□□□ -2.08
SDC3O75056 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SDC3O75056 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SDC3O75056 SNORD56.1-201ENST00000362913 68 ntBASIC2.02□□□□□ -2.09
SDC3O75056 AL591034.2-201ENST00000402839 359 ntBASIC2.02□□□□□ -2.09
SDC3O75056 U3.40-201ENST00000408706 208 ntBASIC2.02□□□□□ -2.09
SDC3O75056 SNORD56-201ENST00000413522 71 ntBASIC2.02□□□□□ -2.09
SDC3O75056 AL606489.2-201ENST00000433886 234 ntBASIC2.02□□□□□ -2.09
SDC3O75056 AC013470.1-201ENST00000453438 462 ntBASIC2.02□□□□□ -2.09
SDC3O75056 AC083798.1-201ENST00000472671 131 ntBASIC2.02□□□□□ -2.09
SDC3O75056 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.02□□□□□ -2.09
SDC3O75056 AC107953.1-201ENST00000522216 297 ntBASIC2.02□□□□□ -2.09
SDC3O75056 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.02□□□□□ -2.09
SDC3O75056 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.02□□□□□ -2.09
SDC3O75056 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.02□□□□□ -2.09
SDC3O75056 AC093249.1-201ENST00000567049 203 ntBASIC2.02□□□□□ -2.09
SDC3O75056 MIR4424-201ENST00000585257 86 ntBASIC2.02□□□□□ -2.09
SDC3O75056 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.02□□□□□ -2.09
SDC3O75056 MIR6845-201ENST00000613182 61 ntBASIC2.02□□□□□ -2.09
SDC3O75056 AL159153.1-201ENST00000619688 317 ntBASIC2.02□□□□□ -2.09
SDC3O75056 AC007792.1-201ENST00000623023 402 ntBASIC2.02□□□□□ -2.09
SDC3O75056 AC090517.3-201ENST00000625170 141 ntBASIC2.02□□□□□ -2.09
SDC3O75056 MTND4P1-201ENST00000457501 1466 ntBASIC2.01□□□□□ -2.09
SDC3O75056 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SDC3O75056 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.01□□□□□ -2.09
SDC3O75056 RNU6-37P-201ENST00000362692 107 ntBASIC2.01□□□□□ -2.09
SDC3O75056 RNU1-23P-201ENST00000363361 144 ntBASIC2.01□□□□□ -2.09
SDC3O75056 Y_RNA.140-201ENST00000363474 103 ntBASIC2.01□□□□□ -2.09
SDC3O75056 RNU6-105P-201ENST00000363909 104 ntBASIC2.01□□□□□ -2.09
SDC3O75056 RNU6-11P-201ENST00000364234 107 ntBASIC2.01□□□□□ -2.09
SDC3O75056 RNU6-25P-201ENST00000383873 107 ntBASIC2.01□□□□□ -2.09
SDC3O75056 RNU6-1-201ENST00000383898 107 ntBASIC2.01□□□□□ -2.09
SDC3O75056 RNU6-48P-201ENST00000384161 107 ntBASIC2.01□□□□□ -2.09
SDC3O75056 RNU6-36P-201ENST00000384172 107 ntBASIC2.01□□□□□ -2.09
SDC3O75056 RNU6-4P-201ENST00000384205 107 ntBASIC2.01□□□□□ -2.09
SDC3O75056 RNU6-5P-201ENST00000384238 107 ntBASIC2.01□□□□□ -2.09
SDC3O75056 RNU6-3P-201ENST00000384314 107 ntBASIC2.01□□□□□ -2.09
SDC3O75056 Y_RNA.481-201ENST00000384373 102 ntBASIC2.01□□□□□ -2.09
SDC3O75056 RNU6-16P-201ENST00000384385 107 ntBASIC2.01□□□□□ -2.09
SDC3O75056 RNU6-15P-201ENST00000384534 107 ntBASIC2.01□□□□□ -2.09
SDC3O75056 RNU6-2-201ENST00000384627 107 ntBASIC2.01□□□□□ -2.09
SDC3O75056 RNU6-29P-201ENST00000384637 107 ntBASIC2.01□□□□□ -2.09
SDC3O75056 RNU6-9-201ENST00000384776 107 ntBASIC2.01□□□□□ -2.09
SDC3O75056 RNU6-33P-201ENST00000384793 107 ntBASIC2.01□□□□□ -2.09
SDC3O75056 SNORA48.3-201ENST00000391081 134 ntBASIC2.01□□□□□ -2.09
SDC3O75056 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.01□□□□□ -2.09
SDC3O75056 AL591043.1-201ENST00000432461 424 ntBASIC2.01□□□□□ -2.09
SDC3O75056 AL122001.1-201ENST00000457027 370 ntBASIC2.01□□□□□ -2.09
SDC3O75056 AC055731.1-201ENST00000474387 401 ntBASIC2.01□□□□□ -2.09
SDC3O75056 AC104435.1-201ENST00000483483 166 ntBASIC2.01□□□□□ -2.09
SDC3O75056 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.01□□□□□ -2.09
SDC3O75056 RNA5SP458-201ENST00000516188 119 ntBASIC2.01□□□□□ -2.09
SDC3O75056 MIR4529-201ENST00000578110 78 ntBASIC2.01□□□□□ -2.09
SDC3O75056 AL031274.2-201ENST00000599419 203 ntBASIC2.01□□□□□ -2.09
SDC3O75056 AL136363.2-201ENST00000604173 851 ntBASIC2.01□□□□□ -2.09
SDC3O75056 AL670379.2-201ENST00000604983 252 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms