Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.54□□□□□ -2
CACNA1FO60840 SCARNA18-201ENST00000459004 134 ntBASIC2.54□□□□□ -2
CACNA1FO60840 AC079804.2-201ENST00000490376 200 ntBASIC2.54□□□□□ -2
CACNA1FO60840 Y_RNA.691-201ENST00000516611 103 ntBASIC2.54□□□□□ -2
CACNA1FO60840 RNU1-40P-201ENST00000516816 164 ntBASIC2.54□□□□□ -2
CACNA1FO60840 RNU1-97P-201ENST00000516872 164 ntBASIC2.54□□□□□ -2
CACNA1FO60840 COPS8P3-201ENST00000526024 482 ntBASIC2.54□□□□□ -2
CACNA1FO60840 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.54□□□□□ -2
CACNA1FO60840 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.54□□□□□ -2
CACNA1FO60840 AC020661.2-201ENST00000560114 134 ntBASIC2.54□□□□□ -2
CACNA1FO60840 MIR4255-201ENST00000579351 72 ntBASIC2.54□□□□□ -2
CACNA1FO60840 MIR5692C1-201ENST00000585309 91 ntBASIC2.54□□□□□ -2
CACNA1FO60840 AC011890.2-201ENST00000613393 294 ntBASIC2.54□□□□□ -2
CACNA1FO60840 AC068831.7-201ENST00000616954 363 ntBASIC2.54□□□□□ -2
CACNA1FO60840 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.54□□□□□ -2
CACNA1FO60840 AC002543.1-201ENST00000299783 1954 ntBASIC2.53□□□□□ -2
CACNA1FO60840 Y_RNA.197-201ENST00000364004 102 ntBASIC2.53□□□□□ -2
CACNA1FO60840 MIR450B-201ENST00000401182 78 ntBASIC2.53□□□□□ -2
CACNA1FO60840 MTCYBP4-201ENST00000401524 249 ntBASIC2.53□□□□□ -2
CACNA1FO60840 RNU2-3P-201ENST00000410144 191 ntBASIC2.53□□□□□ -2
CACNA1FO60840 RNU6-370P-201ENST00000411008 104 ntBASIC2.53□□□□□ -2
CACNA1FO60840 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.53□□□□□ -2
CACNA1FO60840 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.53□□□□□ -2
CACNA1FO60840 AC092798.1-201ENST00000458542 409 ntBASIC2.53□□□□□ -2
CACNA1FO60840 MTND5P5-201ENST00000503764 376 ntBASIC2.53□□□□□ -2
CACNA1FO60840 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.53□□□□□ -2
CACNA1FO60840 RNU6-798P-201ENST00000516912 103 ntBASIC2.53□□□□□ -2
CACNA1FO60840 SNORA31.22-201ENST00000517204 135 ntBASIC2.53□□□□□ -2
CACNA1FO60840 RNU6-840P-201ENST00000517275 65 ntBASIC2.53□□□□□ -2
CACNA1FO60840 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.53□□□□□ -2
CACNA1FO60840 CYCSP27-201ENST00000527643 293 ntBASIC2.53□□□□□ -2
CACNA1FO60840 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.53□□□□□ -2
CACNA1FO60840 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CACNA1FO60840 AC002984.1-201ENST00000591692 448 ntBASIC2.53□□□□□ -2
CACNA1FO60840 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.53□□□□□ -2
CACNA1FO60840 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CACNA1FO60840 AC103705.1-201ENST00000619013 241 ntBASIC2.53□□□□□ -2
CACNA1FO60840 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.53□□□□□ -2
CACNA1FO60840 ZNF519P1-201ENST00000449011 1626 ntBASIC2.53□□□□□ -2
CACNA1FO60840 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
CACNA1FO60840 RNA5SP138-201ENST00000365098 114 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 MIR135A2-201ENST00000384854 100 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 AL513331.1-201ENST00000411908 397 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 MTND2P23-201ENST00000422990 651 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.52□□□□□ -2.01
CACNA1FO60840 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.52□□□□□ -2.01
CACNA1FO60840 AL035666.1-201ENST00000446195 348 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 SNORD5.1-201ENST00000458800 75 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 Y_RNA.639-201ENST00000458981 102 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.52□□□□□ -2.01
CACNA1FO60840 RPL7P5-201ENST00000471472 736 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.52□□□□□ -2.01
CACNA1FO60840 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.52□□□□□ -2.01
CACNA1FO60840 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.52□□□□□ -2.01
CACNA1FO60840 AC091564.4-201ENST00000533934 2194 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.52□□□□□ -2.01
CACNA1FO60840 AC008737.2-201ENST00000599446 118 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 uc_338.22-201ENST00000622722 187 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CACNA1FO60840 AP000553.5-201ENST00000641933 54 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CACNA1FO60840 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.52□□□□□ -2.01
CACNA1FO60840 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CACNA1FO60840 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CACNA1FO60840 RNU6-474P-201ENST00000384243 107 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 RNU6-43P-201ENST00000384302 107 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 Y_RNA.473-201ENST00000384333 102 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 MIR9-3-201ENST00000385084 90 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 TMEM167AP1-201ENST00000423409 219 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 SKA2P1-201ENST00000425592 390 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 NDUFB4P6-201ENST00000436819 366 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 AC090096.1-201ENST00000489168 390 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 RNU6-1332P-201ENST00000516666 104 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 RANP3-201ENST00000530970 276 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 MIR4790-201ENST00000577799 79 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.52□□□□□ -2.01
CACNA1FO60840 AF038458.1-201ENST00000588406 262 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 AL080274.1-201ENST00000605565 220 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 AC025754.2-201ENST00000606491 432 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CACNA1FO60840 MIR6128-201ENST00000615528 109 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 AL589994.2-201ENST00000621124 579 ntBASIC2.52□□□□□ -2.01
CACNA1FO60840 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CACNA1FO60840 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
CACNA1FO60840 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CACNA1FO60840 Y_RNA.31-201ENST00000362574 102 ntBASIC2.51□□□□□ -2.01
CACNA1FO60840 Y_RNA.216-201ENST00000364205 93 ntBASIC2.51□□□□□ -2.01
CACNA1FO60840 Y_RNA.404-201ENST00000383978 102 ntBASIC2.51□□□□□ -2.01
CACNA1FO60840 MIR1289-2-201ENST00000408360 111 ntBASIC2.51□□□□□ -2.01
CACNA1FO60840 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.51□□□□□ -2.01
CACNA1FO60840 FABP5P14-201ENST00000437273 393 ntBASIC2.51□□□□□ -2.01
CACNA1FO60840 AL137792.2-201ENST00000443484 235 ntBASIC2.51□□□□□ -2.01
CACNA1FO60840 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.51□□□□□ -2.01
CACNA1FO60840 snoU13.23-201ENST00000458863 104 ntBASIC2.51□□□□□ -2.01
CACNA1FO60840 RBBP4P6-201ENST00000508098 202 ntBASIC2.51□□□□□ -2.01
CACNA1FO60840 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.51□□□□□ -2.01
CACNA1FO60840 RNU6-56P-201ENST00000516986 93 ntBASIC2.51□□□□□ -2.01
CACNA1FO60840 RNA5SP454-201ENST00000517231 127 ntBASIC2.51□□□□□ -2.01
CACNA1FO60840 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.51□□□□□ -2.01
CACNA1FO60840 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms