Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.08□□□□□ -1.92
RRP9O43818 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.08□□□□□ -1.92
RRP9O43818 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.08□□□□□ -1.92
RRP9O43818 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.08□□□□□ -1.92
RRP9O43818 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.08□□□□□ -1.92
RRP9O43818 MTND5P1-201ENST00000445440 1375 ntBASIC3.08□□□□□ -1.92
RRP9O43818 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RRP9O43818 MTND5P9-201ENST00000503854 1755 ntBASIC3.07□□□□□ -1.92
RRP9O43818 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RRP9O43818 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RRP9O43818 RNU6-1115P-201ENST00000362490 106 ntBASIC3.07□□□□□ -1.92
RRP9O43818 Y_RNA.123-201ENST00000363338 102 ntBASIC3.07□□□□□ -1.92
RRP9O43818 RNA5SP479-201ENST00000364858 117 ntBASIC3.07□□□□□ -1.92
RRP9O43818 RNA5SP390-201ENST00000410191 113 ntBASIC3.07□□□□□ -1.92
RRP9O43818 AC096664.2-201ENST00000411843 406 ntBASIC3.07□□□□□ -1.92
RRP9O43818 AL139247.1-201ENST00000422768 325 ntBASIC3.07□□□□□ -1.92
RRP9O43818 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.07□□□□□ -1.92
RRP9O43818 AP001025.1-201ENST00000486139 332 ntBASIC3.07□□□□□ -1.92
RRP9O43818 RN7SL323P-201ENST00000494712 295 ntBASIC3.07□□□□□ -1.92
RRP9O43818 GZMAP1-201ENST00000503054 631 ntBASIC3.07□□□□□ -1.92
RRP9O43818 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.07□□□□□ -1.92
RRP9O43818 RNU6-264P-201ENST00000517134 104 ntBASIC3.07□□□□□ -1.92
RRP9O43818 MIR5685-201ENST00000579080 79 ntBASIC3.07□□□□□ -1.92
RRP9O43818 AC090897.2-201ENST00000581715 130 ntBASIC3.07□□□□□ -1.92
RRP9O43818 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.07□□□□□ -1.92
RRP9O43818 MIR3605-201ENST00000583214 100 ntBASIC3.07□□□□□ -1.92
RRP9O43818 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.07□□□□□ -1.92
RRP9O43818 HMGB1P24-202ENST00000615653 685 ntBASIC3.07□□□□□ -1.92
RRP9O43818 AL354798.1-201ENST00000622505 329 ntBASIC3.07□□□□□ -1.92
RRP9O43818 MIR203B-201ENST00000636080 86 ntBASIC3.07□□□□□ -1.92
RRP9O43818 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
RRP9O43818 RNU6-474P-201ENST00000384243 107 ntBASIC3.06□□□□□ -1.92
RRP9O43818 RNU6-622P-201ENST00000384272 103 ntBASIC3.06□□□□□ -1.92
RRP9O43818 RNU6-784P-201ENST00000384330 106 ntBASIC3.06□□□□□ -1.92
RRP9O43818 AC243428.1-201ENST00000421099 264 ntBASIC3.06□□□□□ -1.92
RRP9O43818 MTND4P27-201ENST00000450813 1354 ntBASIC3.06□□□□□ -1.92
RRP9O43818 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.06□□□□□ -1.92
RRP9O43818 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
RRP9O43818 AC022447.4-201ENST00000504053 364 ntBASIC3.06□□□□□ -1.92
RRP9O43818 AC022493.2-201ENST00000506122 481 ntBASIC3.06□□□□□ -1.92
RRP9O43818 RNU5B-3P-201ENST00000516601 115 ntBASIC3.06□□□□□ -1.92
RRP9O43818 CBX3P8-201ENST00000532412 525 ntBASIC3.06□□□□□ -1.92
RRP9O43818 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
RRP9O43818 SNRPGP18-201ENST00000553000 214 ntBASIC3.06□□□□□ -1.92
RRP9O43818 AC020661.2-201ENST00000560114 134 ntBASIC3.06□□□□□ -1.92
RRP9O43818 MIR3171-201ENST00000584270 74 ntBASIC3.06□□□□□ -1.92
RRP9O43818 AL356157.2-201ENST00000605122 111 ntBASIC3.06□□□□□ -1.92
RRP9O43818 RNU6-91P-201ENST00000607774 107 ntBASIC3.06□□□□□ -1.92
RRP9O43818 AC009318.2-201ENST00000610917 651 ntBASIC3.06□□□□□ -1.92
RRP9O43818 uc_338.22-201ENST00000622722 187 ntBASIC3.06□□□□□ -1.92
RRP9O43818 AC110079.1-202ENST00000635213 138 ntBASIC3.06□□□□□ -1.92
RRP9O43818 AC009541.1-201ENST00000438279 2662 ntBASIC3.06□□□□□ -1.92
RRP9O43818 ZNF299P-201ENST00000406845 1804 ntBASIC3.05□□□□□ -1.92
RRP9O43818 RNU6-490P-201ENST00000362985 107 ntBASIC3.05□□□□□ -1.92
RRP9O43818 SNORD50.1-201ENST00000362987 71 ntBASIC3.05□□□□□ -1.92
RRP9O43818 Y_RNA.112-201ENST00000363250 102 ntBASIC3.05□□□□□ -1.92
RRP9O43818 RNU6-213P-201ENST00000384051 104 ntBASIC3.05□□□□□ -1.92
RRP9O43818 Y_RNA.533-201ENST00000384596 114 ntBASIC3.05□□□□□ -1.92
RRP9O43818 MIR544A-201ENST00000384855 91 ntBASIC3.05□□□□□ -1.92
RRP9O43818 MIR554-201ENST00000384874 96 ntBASIC3.05□□□□□ -1.92
RRP9O43818 MIR559-201ENST00000385188 96 ntBASIC3.05□□□□□ -1.92
RRP9O43818 AL512633.1-201ENST00000399931 655 ntBASIC3.05□□□□□ -1.92
RRP9O43818 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.05□□□□□ -1.92
RRP9O43818 AL353997.1-201ENST00000432936 108 ntBASIC3.05□□□□□ -1.92
RRP9O43818 RPS29P7-201ENST00000439662 171 ntBASIC3.05□□□□□ -1.92
RRP9O43818 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.05□□□□□ -1.92
RRP9O43818 AL137792.2-201ENST00000443484 235 ntBASIC3.05□□□□□ -1.92
RRP9O43818 AL358232.1-201ENST00000448030 501 ntBASIC3.05□□□□□ -1.92
RRP9O43818 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.05□□□□□ -1.92
RRP9O43818 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.05□□□□□ -1.92
RRP9O43818 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.05□□□□□ -1.92
RRP9O43818 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.05□□□□□ -1.92
RRP9O43818 RPS29P2-201ENST00000479278 136 ntBASIC3.05□□□□□ -1.92
RRP9O43818 SNORA70.18-201ENST00000516696 98 ntBASIC3.05□□□□□ -1.92
RRP9O43818 AP003072.1-201ENST00000531740 145 ntBASIC3.05□□□□□ -1.92
RRP9O43818 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.05□□□□□ -1.92
RRP9O43818 ANP32BP3-201ENST00000559213 706 ntBASIC3.05□□□□□ -1.92
RRP9O43818 MIR5696-201ENST00000578474 85 ntBASIC3.05□□□□□ -1.92
RRP9O43818 AC006130.2-201ENST00000586202 326 ntBASIC3.05□□□□□ -1.92
RRP9O43818 AL158827.2-201ENST00000602494 330 ntBASIC3.05□□□□□ -1.92
RRP9O43818 SNRPGP17-201ENST00000603780 214 ntBASIC3.05□□□□□ -1.92
RRP9O43818 AC034229.5-201ENST00000624258 185 ntBASIC3.05□□□□□ -1.92
RRP9O43818 AL691447.3-201ENST00000635020 330 ntBASIC3.05□□□□□ -1.92
RRP9O43818 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RRP9O43818 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
RRP9O43818 AC005336.3-201ENST00000623833 2679 ntBASIC3.04□□□□□ -1.92
RRP9O43818 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.04□□□□□ -1.92
RRP9O43818 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
RRP9O43818 Y_RNA.48-201ENST00000362710 103 ntBASIC3.04□□□□□ -1.92
RRP9O43818 SNORD32A-201ENST00000364805 84 ntBASIC3.04□□□□□ -1.92
RRP9O43818 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
RRP9O43818 Y_RNA.463-201ENST00000384271 102 ntBASIC3.04□□□□□ -1.92
RRP9O43818 RNU6-1222P-201ENST00000384615 107 ntBASIC3.04□□□□□ -1.92
RRP9O43818 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
RRP9O43818 AL590004.1-201ENST00000405321 300 ntBASIC3.04□□□□□ -1.92
RRP9O43818 RNU6ATAC-201ENST00000408749 126 ntBASIC3.04□□□□□ -1.92
RRP9O43818 RN7SKP202-201ENST00000410439 330 ntBASIC3.04□□□□□ -1.92
RRP9O43818 RPL23AP95-201ENST00000426806 265 ntBASIC3.04□□□□□ -1.92
RRP9O43818 AC009414.1-201ENST00000427200 443 ntBASIC3.04□□□□□ -1.92
RRP9O43818 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms