Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.08□□□□□ -2.24
SGCEO43556 AC100821.1-201ENST00000523153 2479 ntBASIC1.08□□□□□ -2.24
SGCEO43556 MIR378A-201ENST00000362177 66 ntBASIC1.07□□□□□ -2.24
SGCEO43556 RNU6-371P-201ENST00000364283 108 ntBASIC1.07□□□□□ -2.24
SGCEO43556 RNU2-7P-201ENST00000410794 178 ntBASIC1.07□□□□□ -2.24
SGCEO43556 RPL37P10-201ENST00000412884 288 ntBASIC1.07□□□□□ -2.24
SGCEO43556 AC114491.1-201ENST00000416095 246 ntBASIC1.07□□□□□ -2.24
SGCEO43556 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.07□□□□□ -2.24
SGCEO43556 BTF3P4-201ENST00000418852 495 ntBASIC1.07□□□□□ -2.24
SGCEO43556 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.07□□□□□ -2.24
SGCEO43556 snoU109.3-201ENST00000459477 145 ntBASIC1.07□□□□□ -2.24
SGCEO43556 MTCO2P29-201ENST00000465212 189 ntBASIC1.07□□□□□ -2.24
SGCEO43556 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
SGCEO43556 AC145146.1-201ENST00000496370 254 ntBASIC1.07□□□□□ -2.24
SGCEO43556 AC112204.1-201ENST00000502591 103 ntBASIC1.07□□□□□ -2.24
SGCEO43556 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.07□□□□□ -2.24
SGCEO43556 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.07□□□□□ -2.24
SGCEO43556 MIR3937-201ENST00000580135 106 ntBASIC1.07□□□□□ -2.24
SGCEO43556 MIR3136-201ENST00000583498 78 ntBASIC1.07□□□□□ -2.24
SGCEO43556 AC073413.2-201ENST00000604332 360 ntBASIC1.07□□□□□ -2.24
SGCEO43556 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SGCEO43556 AL157834.3-201ENST00000615543 103 ntBASIC1.07□□□□□ -2.24
SGCEO43556 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.07□□□□□ -2.24
SGCEO43556 AL353770.2-201ENST00000620024 78 ntBASIC1.07□□□□□ -2.24
SGCEO43556 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.07□□□□□ -2.24
SGCEO43556 RNU4-15P-201ENST00000362613 141 ntBASIC1.06□□□□□ -2.24
SGCEO43556 RNU6-1285P-201ENST00000363480 105 ntBASIC1.06□□□□□ -2.24
SGCEO43556 RNU6-142P-201ENST00000384019 107 ntBASIC1.06□□□□□ -2.24
SGCEO43556 RNA5SP111-201ENST00000411386 101 ntBASIC1.06□□□□□ -2.24
SGCEO43556 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.06□□□□□ -2.24
SGCEO43556 MTCO3P41-201ENST00000414801 328 ntBASIC1.06□□□□□ -2.24
SGCEO43556 RPL21P90-201ENST00000415692 466 ntBASIC1.06□□□□□ -2.24
SGCEO43556 AP1B1P2-201ENST00000416196 106 ntBASIC1.06□□□□□ -2.24
SGCEO43556 EXOSC3P1-201ENST00000448649 500 ntBASIC1.06□□□□□ -2.24
SGCEO43556 RPS29P29-201ENST00000456396 171 ntBASIC1.06□□□□□ -2.24
SGCEO43556 AC108078.1-201ENST00000508073 725 ntBASIC1.06□□□□□ -2.24
SGCEO43556 RNU1-86P-201ENST00000516108 154 ntBASIC1.06□□□□□ -2.24
SGCEO43556 RNU1-107P-201ENST00000516617 154 ntBASIC1.06□□□□□ -2.24
SGCEO43556 RNA5SP481-201ENST00000516814 122 ntBASIC1.06□□□□□ -2.24
SGCEO43556 MTND2P7-201ENST00000521337 640 ntBASIC1.06□□□□□ -2.24
SGCEO43556 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.06□□□□□ -2.24
SGCEO43556 AC090821.2-201ENST00000523552 176 ntBASIC1.06□□□□□ -2.24
SGCEO43556 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.06□□□□□ -2.24
SGCEO43556 AP002453.2-201ENST00000533503 320 ntBASIC1.06□□□□□ -2.24
SGCEO43556 AC023043.2-201ENST00000589678 1026 ntBASIC1.06□□□□□ -2.24
SGCEO43556 VN1R80P-201ENST00000597126 338 ntBASIC1.06□□□□□ -2.24
SGCEO43556 AP000942.3-201ENST00000603702 160 ntBASIC1.06□□□□□ -2.24
SGCEO43556 AL034555.1-201ENST00000604816 211 ntBASIC1.06□□□□□ -2.24
SGCEO43556 AC131159.1-201ENST00000621854 213 ntBASIC1.06□□□□□ -2.24
SGCEO43556 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.05□□□□□ -2.24
SGCEO43556 Y_RNA.18-201ENST00000362461 102 ntBASIC1.05□□□□□ -2.24
SGCEO43556 Y_RNA.97-201ENST00000363094 102 ntBASIC1.05□□□□□ -2.24
SGCEO43556 RNU4-91P-201ENST00000364778 135 ntBASIC1.05□□□□□ -2.24
SGCEO43556 RNU6-438P-201ENST00000365561 103 ntBASIC1.05□□□□□ -2.24
SGCEO43556 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.05□□□□□ -2.24
SGCEO43556 RNU6-157P-201ENST00000383957 107 ntBASIC1.05□□□□□ -2.24
SGCEO43556 RNU6-1065P-201ENST00000384513 106 ntBASIC1.05□□□□□ -2.24
SGCEO43556 SNORD115.1-201ENST00000391109 76 ntBASIC1.05□□□□□ -2.24
SGCEO43556 RPS27AP14-201ENST00000422868 454 ntBASIC1.05□□□□□ -2.24
SGCEO43556 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.05□□□□□ -2.24
SGCEO43556 MTND1P20-201ENST00000430341 950 ntBASIC1.05□□□□□ -2.24
SGCEO43556 AC119618.1-201ENST00000434191 222 ntBASIC1.05□□□□□ -2.24
SGCEO43556 MTCYBP39-201ENST00000437562 491 ntBASIC1.05□□□□□ -2.24
SGCEO43556 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.05□□□□□ -2.24
SGCEO43556 USP9YP25-201ENST00000457708 443 ntBASIC1.05□□□□□ -2.24
SGCEO43556 AC117522.1-201ENST00000509821 380 ntBASIC1.05□□□□□ -2.24
SGCEO43556 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.05□□□□□ -2.24
SGCEO43556 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.05□□□□□ -2.24
SGCEO43556 AC084364.2-201ENST00000546924 395 ntBASIC1.05□□□□□ -2.24
SGCEO43556 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.05□□□□□ -2.24
SGCEO43556 AC069114.2-201ENST00000604699 304 ntBASIC1.05□□□□□ -2.24
SGCEO43556 AL157786.1-207ENST00000627771 695 ntBASIC1.05□□□□□ -2.24
SGCEO43556 MTND5P35-201ENST00000557537 1720 ntBASIC1.04□□□□□ -2.24
SGCEO43556 AC010615.1-201ENST00000594254 1764 ntBASIC1.04□□□□□ -2.24
SGCEO43556 RNU6-809P-201ENST00000384461 107 ntBASIC1.04□□□□□ -2.24
SGCEO43556 RNU2-39P-201ENST00000410604 198 ntBASIC1.04□□□□□ -2.24
SGCEO43556 EIF1P1-201ENST00000421436 341 ntBASIC1.04□□□□□ -2.24
SGCEO43556 AC092648.1-201ENST00000425870 423 ntBASIC1.04□□□□□ -2.24
SGCEO43556 AC084290.1-201ENST00000434995 374 ntBASIC1.04□□□□□ -2.24
SGCEO43556 AC104806.1-201ENST00000508720 308 ntBASIC1.04□□□□□ -2.24
SGCEO43556 AC079140.3-201ENST00000511111 550 ntBASIC1.04□□□□□ -2.24
SGCEO43556 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.04□□□□□ -2.24
SGCEO43556 MTND4LP18-201ENST00000526864 291 ntBASIC1.04□□□□□ -2.24
SGCEO43556 AP001893.2-201ENST00000526949 202 ntBASIC1.04□□□□□ -2.24
SGCEO43556 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.04□□□□□ -2.24
SGCEO43556 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.04□□□□□ -2.24
SGCEO43556 AC090578.1-201ENST00000604955 591 ntBASIC1.04□□□□□ -2.24
SGCEO43556 U4.7-201ENST00000638126 106 ntBASIC1.04□□□□□ -2.24
SGCEO43556 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SGCEO43556 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SGCEO43556 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.03□□□□□ -2.24
SGCEO43556 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
SGCEO43556 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
SGCEO43556 SNORA22-201ENST00000383907 134 ntBASIC1.03□□□□□ -2.24
SGCEO43556 SNORA24.1-201ENST00000384401 135 ntBASIC1.03□□□□□ -2.24
SGCEO43556 SNORA22C-201ENST00000384614 134 ntBASIC1.03□□□□□ -2.24
SGCEO43556 SNORA12-201ENST00000391162 147 ntBASIC1.03□□□□□ -2.24
SGCEO43556 C1DP2-201ENST00000418167 426 ntBASIC1.03□□□□□ -2.24
SGCEO43556 MRPL35P3-201ENST00000421557 364 ntBASIC1.03□□□□□ -2.24
SGCEO43556 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms