Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.92□□□□□ -1.78
SRGAP3O43295 AP002826.1-201ENST00000608835 315 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 U1.23-201ENST00000610293 146 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 RNU1-68P-201ENST00000615382 146 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 MIR8057-201ENST00000620957 69 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 U1.39-201ENST00000621562 146 ntBASIC3.92□□□□□ -1.78
SRGAP3O43295 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.92□□□□□ -1.78
SRGAP3O43295 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SRGAP3O43295 MIR335-201ENST00000362173 94 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 snoU2_19.2-201ENST00000363024 80 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 Y_RNA.150-201ENST00000363562 102 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 SNORA9-201ENST00000384215 133 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 Y_RNA.785-201ENST00000384290 109 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 RNU6-166P-201ENST00000384371 107 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 Y_RNA.555-201ENST00000384673 110 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 SNORA11.1-201ENST00000408133 129 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 AP000275.1-201ENST00000411943 390 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 TOMM22P1-201ENST00000418578 312 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.91□□□□□ -1.78
SRGAP3O43295 AL078601.1-201ENST00000444542 271 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 AC092798.1-201ENST00000458542 409 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 RPS29P27-201ENST00000463711 170 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.91□□□□□ -1.78
SRGAP3O43295 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.91□□□□□ -1.78
SRGAP3O43295 AC023141.12-201ENST00000512399 199 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 SNORA31.6-201ENST00000516241 130 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 RNA5SP165-201ENST00000517142 115 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 RNA5SP291-201ENST00000517222 105 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 CASP1P1-201ENST00000526345 212 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 MIR4300-201ENST00000581016 96 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.91□□□□□ -1.78
SRGAP3O43295 SNRPGP15-201ENST00000600149 222 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.91□□□□□ -1.78
SRGAP3O43295 AL450472.1-202ENST00000637286 180 ntBASIC3.91□□□□□ -1.78
SRGAP3O43295 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
SRGAP3O43295 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
SRGAP3O43295 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.9□□□□□ -1.78
SRGAP3O43295 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SRGAP3O43295 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SRGAP3O43295 Y_RNA.143-201ENST00000363520 106 ntBASIC3.9□□□□□ -1.79
SRGAP3O43295 Y_RNA.274-201ENST00000364714 101 ntBASIC3.9□□□□□ -1.79
SRGAP3O43295 Y_RNA.297-201ENST00000364950 91 ntBASIC3.9□□□□□ -1.79
SRGAP3O43295 Y_RNA.352-201ENST00000365439 102 ntBASIC3.9□□□□□ -1.79
SRGAP3O43295 RNU6-1279P-201ENST00000383917 103 ntBASIC3.9□□□□□ -1.79
SRGAP3O43295 RNU2-14P-201ENST00000411053 191 ntBASIC3.9□□□□□ -1.79
SRGAP3O43295 TOMM22P6-201ENST00000465035 409 ntBASIC3.9□□□□□ -1.79
SRGAP3O43295 RN7SL442P-201ENST00000473804 320 ntBASIC3.9□□□□□ -1.79
SRGAP3O43295 S100A11P1-201ENST00000477525 312 ntBASIC3.9□□□□□ -1.79
SRGAP3O43295 RNU7-175P-201ENST00000515915 61 ntBASIC3.9□□□□□ -1.79
SRGAP3O43295 Y_RNA.700-201ENST00000516806 100 ntBASIC3.9□□□□□ -1.79
SRGAP3O43295 RN7SKP272-201ENST00000516988 232 ntBASIC3.9□□□□□ -1.79
SRGAP3O43295 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.9□□□□□ -1.79
SRGAP3O43295 AC136932.1-201ENST00000574771 208 ntBASIC3.9□□□□□ -1.79
SRGAP3O43295 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.9□□□□□ -1.79
SRGAP3O43295 RPL23AP78-201ENST00000599928 470 ntBASIC3.9□□□□□ -1.79
SRGAP3O43295 AC005046.1-201ENST00000608515 625 ntBASIC3.9□□□□□ -1.79
SRGAP3O43295 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.9□□□□□ -1.79
SRGAP3O43295 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
SRGAP3O43295 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.9□□□□□ -1.79
SRGAP3O43295 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.9□□□□□ -1.79
SRGAP3O43295 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SRGAP3O43295 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
SRGAP3O43295 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.89□□□□□ -1.79
SRGAP3O43295 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.89□□□□□ -1.79
SRGAP3O43295 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SRGAP3O43295 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SRGAP3O43295 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SRGAP3O43295 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.89□□□□□ -1.79
SRGAP3O43295 Y_RNA.16-201ENST00000362421 102 ntBASIC3.89□□□□□ -1.79
SRGAP3O43295 Y_RNA.29-201ENST00000362570 113 ntBASIC3.89□□□□□ -1.79
SRGAP3O43295 Y_RNA.270-201ENST00000364693 104 ntBASIC3.89□□□□□ -1.79
SRGAP3O43295 Y_RNA.277-201ENST00000364754 102 ntBASIC3.89□□□□□ -1.79
SRGAP3O43295 RNU6-336P-201ENST00000364891 107 ntBASIC3.89□□□□□ -1.79
SRGAP3O43295 RNU6-741P-201ENST00000383889 107 ntBASIC3.89□□□□□ -1.79
SRGAP3O43295 MIR491-201ENST00000384877 84 ntBASIC3.89□□□□□ -1.79
SRGAP3O43295 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SRGAP3O43295 SNORD115-46-201ENST00000390982 71 ntBASIC3.89□□□□□ -1.79
SRGAP3O43295 MIR1290-201ENST00000408735 78 ntBASIC3.89□□□□□ -1.79
SRGAP3O43295 NDUFB4P7-201ENST00000423198 363 ntBASIC3.89□□□□□ -1.79
SRGAP3O43295 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.89□□□□□ -1.79
SRGAP3O43295 AC013470.1-201ENST00000453438 462 ntBASIC3.89□□□□□ -1.79
SRGAP3O43295 RNU6-1338P-201ENST00000516328 91 ntBASIC3.89□□□□□ -1.79
SRGAP3O43295 RNU5B-3P-201ENST00000516601 115 ntBASIC3.89□□□□□ -1.79
SRGAP3O43295 AC104581.2-201ENST00000572227 430 ntBASIC3.89□□□□□ -1.79
SRGAP3O43295 AC099506.2-201ENST00000623074 221 ntBASIC3.89□□□□□ -1.79
SRGAP3O43295 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.89□□□□□ -1.79
SRGAP3O43295 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SRGAP3O43295 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SRGAP3O43295 RNU1-35P-201ENST00000362782 153 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 RNU6-1266P-201ENST00000362794 105 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 RNY3P4-201ENST00000384428 101 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 MIR23A-201ENST00000385245 73 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 EI24P2-201ENST00000397776 1076 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 RNA5SP239-201ENST00000410218 129 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 RNU2-20P-201ENST00000410425 191 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 Y_RNA.602-201ENST00000410535 92 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 RNU2-68P-201ENST00000410878 191 ntBASIC3.88□□□□□ -1.79
SRGAP3O43295 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.88□□□□□ -1.79
SRGAP3O43295 RPL21P40-201ENST00000428586 483 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms