Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AL391987.6-201ENST00000305671 199 ntBASIC0.57□□□□□ -2.32
HMGB3O15347 RNU6-511P-201ENST00000363496 107 ntBASIC0.57□□□□□ -2.32
HMGB3O15347 RNU6-960P-201ENST00000364056 120 ntBASIC0.57□□□□□ -2.32
HMGB3O15347 SNORD114-24-201ENST00000365029 72 ntBASIC0.57□□□□□ -2.32
HMGB3O15347 RNU6-482P-201ENST00000391068 107 ntBASIC0.57□□□□□ -2.32
HMGB3O15347 RPS3AP36-201ENST00000398190 775 ntBASIC0.57□□□□□ -2.32
HMGB3O15347 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.57□□□□□ -2.32
HMGB3O15347 MTCO3P41-201ENST00000414801 328 ntBASIC0.57□□□□□ -2.32
HMGB3O15347 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.57□□□□□ -2.32
HMGB3O15347 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.57□□□□□ -2.32
HMGB3O15347 MTCO3P29-201ENST00000432119 779 ntBASIC0.57□□□□□ -2.32
HMGB3O15347 GTF2IP13-201ENST00000438487 386 ntBASIC0.57□□□□□ -2.32
HMGB3O15347 AC117454.1-201ENST00000491120 168 ntBASIC0.57□□□□□ -2.32
HMGB3O15347 AC021146.8-201ENST00000507455 733 ntBASIC0.57□□□□□ -2.32
HMGB3O15347 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.57□□□□□ -2.32
HMGB3O15347 AL442163.3-201ENST00000554110 156 ntBASIC0.57□□□□□ -2.32
HMGB3O15347 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.57□□□□□ -2.32
HMGB3O15347 AC024060.1-201ENST00000607052 494 ntBASIC0.57□□□□□ -2.32
HMGB3O15347 AL391813.2-201ENST00000609113 322 ntBASIC0.57□□□□□ -2.32
HMGB3O15347 RNU6-1285P-201ENST00000363480 105 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 RNU6-384P-201ENST00000364900 104 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 RNU6-53P-201ENST00000365367 106 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 MIR222-201ENST00000384992 110 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 SNORA12.2-201ENST00000391040 156 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 ELOCP17-201ENST00000414751 326 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.56□□□□□ -2.32
HMGB3O15347 ELOCP9-201ENST00000418624 239 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 AC069257.2-201ENST00000441819 155 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.56□□□□□ -2.32
HMGB3O15347 RPS27P22-201ENST00000478056 241 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 MTCO3P9-201ENST00000506989 781 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 ATP5EP1-201ENST00000510257 156 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 AC079395.1-201ENST00000510981 262 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 MTCO3P28-201ENST00000513351 515 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.56□□□□□ -2.32
HMGB3O15347 SNORA31.16-201ENST00000516773 139 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 AC115990.1-201ENST00000526957 301 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.56□□□□□ -2.32
HMGB3O15347 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.56□□□□□ -2.32
HMGB3O15347 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.56□□□□□ -2.32
HMGB3O15347 MTND3P13-201ENST00000574391 343 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 MIR3973-201ENST00000579824 107 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 AC083806.3-201ENST00000614016 455 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 U6.42-201ENST00000618440 107 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 AL138955.1-201ENST00000622881 1040 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.56□□□□□ -2.32
HMGB3O15347 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.56□□□□□ -2.32
HMGB3O15347 AC134026.1-201ENST00000623249 2239 ntBASIC0.56□□□□□ -2.32
HMGB3O15347 MIR764-201ENST00000390811 85 ntBASIC0.55□□□□□ -2.32
HMGB3O15347 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.55□□□□□ -2.32
HMGB3O15347 CYCSP33-201ENST00000414485 327 ntBASIC0.55□□□□□ -2.32
HMGB3O15347 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.55□□□□□ -2.32
HMGB3O15347 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.55□□□□□ -2.32
HMGB3O15347 AL008629.1-201ENST00000438615 184 ntBASIC0.55□□□□□ -2.32
HMGB3O15347 ART2BP-201ENST00000453501 499 ntBASIC0.55□□□□□ -2.32
HMGB3O15347 SNORA59A-201ENST00000459326 152 ntBASIC0.55□□□□□ -2.32
HMGB3O15347 SNORD124-201ENST00000459577 104 ntBASIC0.55□□□□□ -2.32
HMGB3O15347 AC022447.4-201ENST00000504053 364 ntBASIC0.55□□□□□ -2.32
HMGB3O15347 PDCD5P2-201ENST00000507570 312 ntBASIC0.55□□□□□ -2.32
HMGB3O15347 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.55□□□□□ -2.32
HMGB3O15347 RN7SKP49-201ENST00000516675 260 ntBASIC0.55□□□□□ -2.32
HMGB3O15347 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.55□□□□□ -2.32
HMGB3O15347 AC087894.1-201ENST00000538359 518 ntBASIC0.55□□□□□ -2.32
HMGB3O15347 VN1R107P-201ENST00000601784 209 ntBASIC0.55□□□□□ -2.32
HMGB3O15347 AC131159.1-201ENST00000621854 213 ntBASIC0.55□□□□□ -2.32
HMGB3O15347 AL159152.1-201ENST00000635019 2587 ntBASIC0.55□□□□□ -2.32
HMGB3O15347 RNY3P13-201ENST00000365542 102 ntBASIC0.54□□□□□ -2.32
HMGB3O15347 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
HMGB3O15347 AL117342.1-201ENST00000404861 406 ntBASIC0.54□□□□□ -2.32
HMGB3O15347 RNU2-62P-201ENST00000410868 191 ntBASIC0.54□□□□□ -2.32
HMGB3O15347 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.54□□□□□ -2.32
HMGB3O15347 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.54□□□□□ -2.32
HMGB3O15347 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.54□□□□□ -2.32
HMGB3O15347 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.54□□□□□ -2.32
HMGB3O15347 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.54□□□□□ -2.32
HMGB3O15347 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.54□□□□□ -2.32
HMGB3O15347 AC074344.1-201ENST00000512823 224 ntBASIC0.54□□□□□ -2.32
HMGB3O15347 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.54□□□□□ -2.32
HMGB3O15347 AC008751.2-201ENST00000597885 980 ntBASIC0.54□□□□□ -2.32
HMGB3O15347 AL034555.1-201ENST00000604816 211 ntBASIC0.54□□□□□ -2.32
HMGB3O15347 BCRP9-201ENST00000605312 388 ntBASIC0.54□□□□□ -2.32
HMGB3O15347 AL133216.2-202ENST00000634512 349 ntBASIC0.54□□□□□ -2.32
HMGB3O15347 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
HMGB3O15347 AC009541.1-201ENST00000438279 2662 ntBASIC0.53□□□□□ -2.32
HMGB3O15347 SNORD114-27-201ENST00000363766 70 ntBASIC0.53□□□□□ -2.32
HMGB3O15347 Y_RNA.192-201ENST00000363977 102 ntBASIC0.53□□□□□ -2.32
HMGB3O15347 RNU1-96P-201ENST00000364163 162 ntBASIC0.53□□□□□ -2.32
HMGB3O15347 RNU6-438P-201ENST00000365561 103 ntBASIC0.53□□□□□ -2.32
HMGB3O15347 SNORA32.2-201ENST00000384049 122 ntBASIC0.53□□□□□ -2.32
HMGB3O15347 RNU6-769P-201ENST00000384407 104 ntBASIC0.53□□□□□ -2.32
HMGB3O15347 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.53□□□□□ -2.32
HMGB3O15347 MIR1261-201ENST00000408659 82 ntBASIC0.53□□□□□ -2.32
HMGB3O15347 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.53□□□□□ -2.32
HMGB3O15347 AL117351.1-201ENST00000438864 766 ntBASIC0.53□□□□□ -2.32
HMGB3O15347 AC073910.1-201ENST00000445047 438 ntBASIC0.53□□□□□ -2.32
HMGB3O15347 SNRPFP4-201ENST00000456366 242 ntBASIC0.53□□□□□ -2.32
HMGB3O15347 RPS26P45-201ENST00000471748 340 ntBASIC0.53□□□□□ -2.32
HMGB3O15347 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.53□□□□□ -2.32
HMGB3O15347 RNA5SP168-201ENST00000516642 112 ntBASIC0.53□□□□□ -2.32
HMGB3O15347 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms