Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC005908.1-201ENST00000468701 347 ntBASIC1.47□□□□□ -2.17
LSM1O15116 AC132942.1-201ENST00000486753 483 ntBASIC1.47□□□□□ -2.17
LSM1O15116 AC074344.1-201ENST00000512823 224 ntBASIC1.47□□□□□ -2.17
LSM1O15116 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
LSM1O15116 AP005597.4-201ENST00000526762 229 ntBASIC1.47□□□□□ -2.17
LSM1O15116 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.47□□□□□ -2.17
LSM1O15116 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.47□□□□□ -2.17
LSM1O15116 AC090578.1-201ENST00000604955 591 ntBASIC1.47□□□□□ -2.17
LSM1O15116 AL136370.1-201ENST00000608166 691 ntBASIC1.47□□□□□ -2.17
LSM1O15116 AC097372.5-201ENST00000623665 376 ntBASIC1.47□□□□□ -2.17
LSM1O15116 AC008993.2-201ENST00000631744 806 ntBASIC1.47□□□□□ -2.17
LSM1O15116 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
LSM1O15116 LINC02555-201ENST00000563933 1951 ntBASIC1.47□□□□□ -2.17
LSM1O15116 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.47□□□□□ -2.17
LSM1O15116 AP000560.1-201ENST00000624150 1937 ntBASIC1.46□□□□□ -2.18
LSM1O15116 Y_RNA.367-201ENST00000365544 101 ntBASIC1.46□□□□□ -2.18
LSM1O15116 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
LSM1O15116 SNORA12-201ENST00000391162 147 ntBASIC1.46□□□□□ -2.18
LSM1O15116 Y_RNA.598-201ENST00000410480 95 ntBASIC1.46□□□□□ -2.18
LSM1O15116 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.46□□□□□ -2.18
LSM1O15116 Z99497.1-201ENST00000421282 135 ntBASIC1.46□□□□□ -2.18
LSM1O15116 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.46□□□□□ -2.18
LSM1O15116 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.46□□□□□ -2.18
LSM1O15116 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.46□□□□□ -2.18
LSM1O15116 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.46□□□□□ -2.18
LSM1O15116 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.46□□□□□ -2.18
LSM1O15116 MTCO1P44-201ENST00000441935 243 ntBASIC1.46□□□□□ -2.18
LSM1O15116 HMGN2P18-201ENST00000450680 270 ntBASIC1.46□□□□□ -2.18
LSM1O15116 SNORA25.15-201ENST00000516487 89 ntBASIC1.46□□□□□ -2.18
LSM1O15116 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.46□□□□□ -2.18
LSM1O15116 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.46□□□□□ -2.18
LSM1O15116 MIR3683-201ENST00000580847 82 ntBASIC1.46□□□□□ -2.18
LSM1O15116 AC103987.3-201ENST00000582071 292 ntBASIC1.46□□□□□ -2.18
LSM1O15116 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.46□□□□□ -2.18
LSM1O15116 AL158827.2-201ENST00000602494 330 ntBASIC1.46□□□□□ -2.18
LSM1O15116 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.46□□□□□ -2.18
LSM1O15116 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.46□□□□□ -2.18
LSM1O15116 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
LSM1O15116 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
LSM1O15116 AL691447.3-201ENST00000635020 330 ntBASIC1.46□□□□□ -2.18
LSM1O15116 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.46□□□□□ -2.18
LSM1O15116 RNU1-62P-201ENST00000362599 164 ntBASIC1.45□□□□□ -2.18
LSM1O15116 RNU6-527P-201ENST00000363425 104 ntBASIC1.45□□□□□ -2.18
LSM1O15116 RNU6-112P-201ENST00000363599 104 ntBASIC1.45□□□□□ -2.18
LSM1O15116 RNY1P12-201ENST00000364251 105 ntBASIC1.45□□□□□ -2.18
LSM1O15116 Y_RNA.324-201ENST00000365165 102 ntBASIC1.45□□□□□ -2.18
LSM1O15116 RNU6-142P-201ENST00000384019 107 ntBASIC1.45□□□□□ -2.18
LSM1O15116 MTCYBP2-201ENST00000407745 171 ntBASIC1.45□□□□□ -2.18
LSM1O15116 C1DP2-201ENST00000418167 426 ntBASIC1.45□□□□□ -2.18
LSM1O15116 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.45□□□□□ -2.18
LSM1O15116 AL590556.1-201ENST00000423231 483 ntBASIC1.45□□□□□ -2.18
LSM1O15116 UBE2D3P4-201ENST00000441973 436 ntBASIC1.45□□□□□ -2.18
LSM1O15116 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.45□□□□□ -2.18
LSM1O15116 ART2BP-201ENST00000453501 499 ntBASIC1.45□□□□□ -2.18
LSM1O15116 AC130509.1-201ENST00000464158 433 ntBASIC1.45□□□□□ -2.18
LSM1O15116 AC145146.1-201ENST00000496370 254 ntBASIC1.45□□□□□ -2.18
LSM1O15116 AC116337.1-201ENST00000509680 687 ntBASIC1.45□□□□□ -2.18
LSM1O15116 MTND3P5-201ENST00000512798 333 ntBASIC1.45□□□□□ -2.18
LSM1O15116 RNU6-1129P-201ENST00000515964 104 ntBASIC1.45□□□□□ -2.18
LSM1O15116 MIR449C-201ENST00000516047 92 ntBASIC1.45□□□□□ -2.18
LSM1O15116 SNORD27.1-201ENST00000516319 72 ntBASIC1.45□□□□□ -2.18
LSM1O15116 RNA5SP490-201ENST00000517141 136 ntBASIC1.45□□□□□ -2.18
LSM1O15116 AP001372.4-201ENST00000524889 472 ntBASIC1.45□□□□□ -2.18
LSM1O15116 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.45□□□□□ -2.18
LSM1O15116 AP003034.1-201ENST00000534621 422 ntBASIC1.45□□□□□ -2.18
LSM1O15116 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.45□□□□□ -2.18
LSM1O15116 AC027807.1-201ENST00000559921 996 ntBASIC1.45□□□□□ -2.18
LSM1O15116 BNIP3P16-201ENST00000589779 534 ntBASIC1.45□□□□□ -2.18
LSM1O15116 PRR13P7-201ENST00000605538 430 ntBASIC1.45□□□□□ -2.18
LSM1O15116 MIR8074-201ENST00000615081 81 ntBASIC1.45□□□□□ -2.18
LSM1O15116 AC130454.1-201ENST00000622948 401 ntBASIC1.45□□□□□ -2.18
LSM1O15116 MTND4P4-201ENST00000439033 1366 ntBASIC1.45□□□□□ -2.18
LSM1O15116 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.44□□□□□ -2.18
LSM1O15116 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
LSM1O15116 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.44□□□□□ -2.18
LSM1O15116 RNU6-74P-201ENST00000384235 107 ntBASIC1.44□□□□□ -2.18
LSM1O15116 RNU6-296P-201ENST00000384608 107 ntBASIC1.44□□□□□ -2.18
LSM1O15116 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
LSM1O15116 MIR1323-201ENST00000408090 73 ntBASIC1.44□□□□□ -2.18
LSM1O15116 MIR1304-201ENST00000408243 91 ntBASIC1.44□□□□□ -2.18
LSM1O15116 AC011233.1-201ENST00000422812 283 ntBASIC1.44□□□□□ -2.18
LSM1O15116 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.44□□□□□ -2.18
LSM1O15116 AL121890.1-201ENST00000435457 205 ntBASIC1.44□□□□□ -2.18
LSM1O15116 AC073614.1-201ENST00000438690 650 ntBASIC1.44□□□□□ -2.18
LSM1O15116 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.44□□□□□ -2.18
LSM1O15116 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.44□□□□□ -2.18
LSM1O15116 FTH1P25-201ENST00000447665 469 ntBASIC1.44□□□□□ -2.18
LSM1O15116 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.44□□□□□ -2.18
LSM1O15116 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.44□□□□□ -2.18
LSM1O15116 AC087477.1-201ENST00000465747 340 ntBASIC1.44□□□□□ -2.18
LSM1O15116 AC023790.1-201ENST00000482174 347 ntBASIC1.44□□□□□ -2.18
LSM1O15116 Vault.3-201ENST00000516676 95 ntBASIC1.44□□□□□ -2.18
LSM1O15116 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.44□□□□□ -2.18
LSM1O15116 AC023050.3-201ENST00000541142 333 ntBASIC1.44□□□□□ -2.18
LSM1O15116 AC087883.1-201ENST00000551882 391 ntBASIC1.44□□□□□ -2.18
LSM1O15116 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.44□□□□□ -2.18
LSM1O15116 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.44□□□□□ -2.18
LSM1O15116 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.44□□□□□ -2.18
LSM1O15116 MIR3136-201ENST00000583498 78 ntBASIC1.44□□□□□ -2.18
LSM1O15116 VN1R107P-201ENST00000601784 209 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms