Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL161651.1-201ENST00000440882 223 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM38O00635 RPL27AP5-201ENST00000469428 449 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 AC006445.1-201ENST00000491925 405 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 AC116337.1-201ENST00000509680 687 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 MTND1P19-201ENST00000511780 315 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 SNORA14.1-201ENST00000516113 141 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 RNY3P15-201ENST00000516297 97 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 RNA5SP380-201ENST00000517190 98 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 SCARNA20.6-201ENST00000517251 106 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TRIM38O00635 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM38O00635 AC005476.1-201ENST00000554427 397 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 ATP1B3P1-201ENST00000605365 821 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 SNORD58B-201ENST00000607313 66 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 MIR6852-201ENST00000621699 66 ntBASIC3.25□□□□□ -1.89
TRIM38O00635 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TRIM38O00635 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM38O00635 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM38O00635 AC010889.1-201ENST00000566193 2666 ntBASIC3.24□□□□□ -1.89
TRIM38O00635 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM38O00635 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM38O00635 RNU1-100P-201ENST00000365255 165 ntBASIC3.24□□□□□ -1.89
TRIM38O00635 RNU6-1050P-201ENST00000410388 107 ntBASIC3.24□□□□□ -1.89
TRIM38O00635 RNU4-47P-201ENST00000410876 114 ntBASIC3.24□□□□□ -1.89
TRIM38O00635 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM38O00635 AC243428.1-201ENST00000421099 264 ntBASIC3.24□□□□□ -1.89
TRIM38O00635 RPL7P37-201ENST00000425095 738 ntBASIC3.24□□□□□ -1.89
TRIM38O00635 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM38O00635 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.24□□□□□ -1.89
TRIM38O00635 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM38O00635 RNA5SP217-201ENST00000515959 91 ntBASIC3.24□□□□□ -1.89
TRIM38O00635 RNU2-53P-201ENST00000516257 147 ntBASIC3.24□□□□□ -1.89
TRIM38O00635 Y_RNA.708-201ENST00000516950 96 ntBASIC3.24□□□□□ -1.89
TRIM38O00635 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM38O00635 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM38O00635 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TRIM38O00635 AC092447.9-201ENST00000603395 144 ntBASIC3.24□□□□□ -1.89
TRIM38O00635 AP000787.2-201ENST00000604432 568 ntBASIC3.24□□□□□ -1.89
TRIM38O00635 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM38O00635 PISRT1.1-201ENST00000616930 107 ntBASIC3.24□□□□□ -1.89
TRIM38O00635 MIR8062-201ENST00000621515 85 ntBASIC3.24□□□□□ -1.89
TRIM38O00635 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
TRIM38O00635 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM38O00635 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM38O00635 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM38O00635 RNU6-562P-201ENST00000362731 107 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 RNU6-490P-201ENST00000362985 107 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 Y_RNA.106-201ENST00000363189 100 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 RNU1-115P-201ENST00000365329 160 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 AL358075.3-201ENST00000426289 226 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 AC236972.1-201ENST00000433225 199 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 SNAP23P1-201ENST00000433229 246 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.23□□□□□ -1.89
TRIM38O00635 DYNLT3P2-201ENST00000442517 295 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 HIGD1AP2-201ENST00000446367 280 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM38O00635 RPS29P12-201ENST00000460178 152 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 AC008571.1-201ENST00000467232 300 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM38O00635 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM38O00635 RAC1P5-201ENST00000512182 576 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 TBCAP3-201ENST00000512475 312 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 RNA5SP384-201ENST00000516615 116 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 RNU4-77P-201ENST00000516692 156 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM38O00635 GNAI2P1-201ENST00000541815 315 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 LARP7P3-201ENST00000579888 337 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 AL391813.1-201ENST00000603098 260 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 AL133393.1-201ENST00000603277 287 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 AL355877.2-201ENST00000603670 358 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 AC073657.2-201ENST00000605661 303 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 AC002044.1-201ENST00000606707 158 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM38O00635 AC006386.2-201ENST00000624491 75 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 AC012005.1-201ENST00000624575 75 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM38O00635 AC004944.1-201ENST00000517807 3059 ntBASIC3.23□□□□□ -1.89
TRIM38O00635 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM38O00635 MIR422A-201ENST00000362286 90 ntBASIC3.22□□□□□ -1.89
TRIM38O00635 Y_RNA.60-201ENST00000362831 98 ntBASIC3.22□□□□□ -1.89
TRIM38O00635 Y_RNA.210-201ENST00000364161 110 ntBASIC3.22□□□□□ -1.89
TRIM38O00635 RNU6-1280P-201ENST00000365211 107 ntBASIC3.22□□□□□ -1.89
TRIM38O00635 MT-TW-201ENST00000387382 68 ntBASIC3.22□□□□□ -1.89
TRIM38O00635 RPL32P35-201ENST00000415214 394 ntBASIC3.22□□□□□ -1.89
TRIM38O00635 PTGES3P4-201ENST00000426243 356 ntBASIC3.22□□□□□ -1.89
TRIM38O00635 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM38O00635 AC022493.2-201ENST00000506122 481 ntBASIC3.22□□□□□ -1.89
TRIM38O00635 SCARNA16.2-201ENST00000516520 172 ntBASIC3.22□□□□□ -1.89
TRIM38O00635 Y_RNA.687-201ENST00000516558 91 ntBASIC3.22□□□□□ -1.89
TRIM38O00635 SNORD116.3-201ENST00000517176 78 ntBASIC3.22□□□□□ -1.89
TRIM38O00635 AC131281.1-201ENST00000522984 164 ntBASIC3.22□□□□□ -1.89
TRIM38O00635 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM38O00635 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM38O00635 MIR5692C1-201ENST00000585309 91 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms