Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC024067.1-201ENST00000426199 223 ntBASIC4.16□□□□□ -1.74
SOX1O00570 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.16□□□□□ -1.74
SOX1O00570 HMGB3P8-201ENST00000449709 577 ntBASIC4.16□□□□□ -1.74
SOX1O00570 RNU2-27P-201ENST00000516185 142 ntBASIC4.16□□□□□ -1.74
SOX1O00570 AC069240.1-201ENST00000548774 375 ntBASIC4.16□□□□□ -1.74
SOX1O00570 AC021231.3-201ENST00000558497 370 ntBASIC4.16□□□□□ -1.74
SOX1O00570 AC233702.2-202ENST00000562547 291 ntBASIC4.16□□□□□ -1.74
SOX1O00570 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.16□□□□□ -1.74
SOX1O00570 AL033523.1-201ENST00000605153 153 ntBASIC4.16□□□□□ -1.74
SOX1O00570 AL365265.1-201ENST00000621045 234 ntBASIC4.16□□□□□ -1.74
SOX1O00570 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SOX1O00570 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SOX1O00570 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SOX1O00570 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SOX1O00570 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SOX1O00570 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SOX1O00570 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SOX1O00570 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SOX1O00570 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
SOX1O00570 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
SOX1O00570 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
SOX1O00570 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SOX1O00570 MIR493-201ENST00000385254 89 ntBASIC4.15□□□□□ -1.75
SOX1O00570 Y_RNA.580-201ENST00000391004 95 ntBASIC4.15□□□□□ -1.75
SOX1O00570 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.15□□□□□ -1.75
SOX1O00570 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX1O00570 AC022695.1-201ENST00000522089 237 ntBASIC4.15□□□□□ -1.75
SOX1O00570 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX1O00570 MIR5692C2-201ENST00000577959 77 ntBASIC4.15□□□□□ -1.75
SOX1O00570 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.15□□□□□ -1.75
SOX1O00570 AC048347.1-201ENST00000624621 427 ntBASIC4.15□□□□□ -1.75
SOX1O00570 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SOX1O00570 ZNF962P-201ENST00000443465 3140 ntBASIC4.15□□□□□ -1.75
SOX1O00570 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
SOX1O00570 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SOX1O00570 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.15□□□□□ -1.75
SOX1O00570 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
SOX1O00570 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
SOX1O00570 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
SOX1O00570 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SOX1O00570 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SOX1O00570 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.14□□□□□ -1.75
SOX1O00570 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SOX1O00570 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.14□□□□□ -1.75
SOX1O00570 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.14□□□□□ -1.75
SOX1O00570 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SOX1O00570 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SOX1O00570 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.14□□□□□ -1.75
SOX1O00570 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.14□□□□□ -1.75
SOX1O00570 AC092268.1-201ENST00000342691 405 ntBASIC4.14□□□□□ -1.75
SOX1O00570 SNORA72.2-201ENST00000365028 127 ntBASIC4.14□□□□□ -1.75
SOX1O00570 SNORD96B-201ENST00000386148 79 ntBASIC4.14□□□□□ -1.75
SOX1O00570 SNORA40.19-201ENST00000390846 128 ntBASIC4.14□□□□□ -1.75
SOX1O00570 MIR888-201ENST00000401186 77 ntBASIC4.14□□□□□ -1.75
SOX1O00570 FTH1P15-201ENST00000406984 280 ntBASIC4.14□□□□□ -1.75
SOX1O00570 NDUFS5P4-201ENST00000412983 318 ntBASIC4.14□□□□□ -1.75
SOX1O00570 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.14□□□□□ -1.75
SOX1O00570 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.14□□□□□ -1.75
SOX1O00570 S100A11P2-201ENST00000467589 312 ntBASIC4.14□□□□□ -1.75
SOX1O00570 AL049830.2-201ENST00000480072 201 ntBASIC4.14□□□□□ -1.75
SOX1O00570 AC074133.1-201ENST00000515696 183 ntBASIC4.14□□□□□ -1.75
SOX1O00570 SNORA31.23-201ENST00000517219 133 ntBASIC4.14□□□□□ -1.75
SOX1O00570 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SOX1O00570 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.14□□□□□ -1.75
SOX1O00570 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.14□□□□□ -1.75
SOX1O00570 RPL12P50-201ENST00000603116 116 ntBASIC4.14□□□□□ -1.75
SOX1O00570 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.14□□□□□ -1.75
SOX1O00570 AL357075.2-201ENST00000614906 189 ntBASIC4.14□□□□□ -1.75
SOX1O00570 AC068831.7-201ENST00000616954 363 ntBASIC4.14□□□□□ -1.75
SOX1O00570 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.14□□□□□ -1.75
SOX1O00570 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.14□□□□□ -1.75
SOX1O00570 MTND1P7-201ENST00000632801 297 ntBASIC4.14□□□□□ -1.75
SOX1O00570 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.14□□□□□ -1.75
SOX1O00570 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SOX1O00570 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SOX1O00570 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
SOX1O00570 AC110491.1-201ENST00000562191 2010 ntBASIC4.14□□□□□ -1.75
SOX1O00570 RBBP8P1-201ENST00000449447 1844 ntBASIC4.14□□□□□ -1.75
SOX1O00570 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SOX1O00570 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SOX1O00570 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SOX1O00570 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SOX1O00570 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
SOX1O00570 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SOX1O00570 RNU6-873P-201ENST00000363833 107 ntBASIC4.13□□□□□ -1.75
SOX1O00570 RNU6-884P-201ENST00000363889 107 ntBASIC4.13□□□□□ -1.75
SOX1O00570 RNU6-1027P-201ENST00000383998 107 ntBASIC4.13□□□□□ -1.75
SOX1O00570 CYCSP4-201ENST00000429682 331 ntBASIC4.13□□□□□ -1.75
SOX1O00570 AC112220.1-201ENST00000434628 355 ntBASIC4.13□□□□□ -1.75
SOX1O00570 NDUFB4P6-201ENST00000436819 366 ntBASIC4.13□□□□□ -1.75
SOX1O00570 AC244670.1-201ENST00000436879 112 ntBASIC4.13□□□□□ -1.75
SOX1O00570 AC009237.7-201ENST00000447357 229 ntBASIC4.13□□□□□ -1.75
SOX1O00570 PHBP14-201ENST00000512887 367 ntBASIC4.13□□□□□ -1.75
SOX1O00570 RNU7-143P-201ENST00000516781 65 ntBASIC4.13□□□□□ -1.75
SOX1O00570 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.13□□□□□ -1.75
SOX1O00570 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.13□□□□□ -1.75
SOX1O00570 snoU18.1-201ENST00000629629 71 ntBASIC4.13□□□□□ -1.75
SOX1O00570 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SOX1O00570 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SOX1O00570 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms