Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC-0.1□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU6-216P-201ENST00000363282 104 ntBASIC-0.1□□□□□ -2.43
CHKB-CPT1BH3BT56 AL590556.1-201ENST00000423231 483 ntBASIC-0.1□□□□□ -2.43
CHKB-CPT1BH3BT56 AC244098.3-201ENST00000424803 96 ntBASIC-0.1□□□□□ -2.43
CHKB-CPT1BH3BT56 MTND5P14-201ENST00000441481 1267 ntBASIC-0.1□□□□□ -2.43
CHKB-CPT1BH3BT56 U7.7-201ENST00000459276 60 ntBASIC-0.1□□□□□ -2.43
CHKB-CPT1BH3BT56 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC-0.1□□□□□ -2.43
CHKB-CPT1BH3BT56 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-0.1□□□□□ -2.43
CHKB-CPT1BH3BT56 MIR449C-201ENST00000516047 92 ntBASIC-0.1□□□□□ -2.43
CHKB-CPT1BH3BT56 EIF1AXP2-201ENST00000555940 413 ntBASIC-0.1□□□□□ -2.43
CHKB-CPT1BH3BT56 AC044913.1-201ENST00000557200 430 ntBASIC-0.1□□□□□ -2.43
CHKB-CPT1BH3BT56 AC104229.1-201ENST00000561364 255 ntBASIC-0.1□□□□□ -2.43
CHKB-CPT1BH3BT56 MIR4667-201ENST00000578933 66 ntBASIC-0.1□□□□□ -2.43
CHKB-CPT1BH3BT56 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.1□□□□□ -2.43
CHKB-CPT1BH3BT56 MIR6767-201ENST00000637302 66 ntBASIC-0.1□□□□□ -2.43
CHKB-CPT1BH3BT56 RNU6-534P-201ENST00000364877 106 ntBASIC-0.11□□□□□ -2.43
CHKB-CPT1BH3BT56 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
CHKB-CPT1BH3BT56 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.11□□□□□ -2.43
CHKB-CPT1BH3BT56 SNRPEP8-201ENST00000442866 260 ntBASIC-0.11□□□□□ -2.43
CHKB-CPT1BH3BT56 AL049830.1-201ENST00000468034 425 ntBASIC-0.11□□□□□ -2.43
CHKB-CPT1BH3BT56 RPF2P2-201ENST00000504693 896 ntBASIC-0.11□□□□□ -2.43
CHKB-CPT1BH3BT56 AC027338.1-201ENST00000514840 825 ntBASIC-0.11□□□□□ -2.43
CHKB-CPT1BH3BT56 AC103833.1-201ENST00000517442 172 ntBASIC-0.11□□□□□ -2.43
CHKB-CPT1BH3BT56 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.11□□□□□ -2.43
CHKB-CPT1BH3BT56 MIR3136-201ENST00000583498 78 ntBASIC-0.11□□□□□ -2.43
CHKB-CPT1BH3BT56 FAM106DP-201ENST00000586416 501 ntBASIC-0.11□□□□□ -2.43
CHKB-CPT1BH3BT56 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.11□□□□□ -2.43
CHKB-CPT1BH3BT56 AC007792.1-201ENST00000623023 402 ntBASIC-0.11□□□□□ -2.43
CHKB-CPT1BH3BT56 AC100810.6-201ENST00000638068 285 ntBASIC-0.11□□□□□ -2.43
CHKB-CPT1BH3BT56 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
CHKB-CPT1BH3BT56 RNU6-353P-201ENST00000364266 108 ntBASIC-0.12□□□□□ -2.43
CHKB-CPT1BH3BT56 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
CHKB-CPT1BH3BT56 RNY1P8-201ENST00000383970 114 ntBASIC-0.12□□□□□ -2.43
CHKB-CPT1BH3BT56 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.12□□□□□ -2.43
CHKB-CPT1BH3BT56 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.12□□□□□ -2.43
CHKB-CPT1BH3BT56 AC073614.1-201ENST00000438690 650 ntBASIC-0.12□□□□□ -2.43
CHKB-CPT1BH3BT56 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.12□□□□□ -2.43
CHKB-CPT1BH3BT56 RNU6-922P-201ENST00000516753 99 ntBASIC-0.12□□□□□ -2.43
CHKB-CPT1BH3BT56 AC007834.2-201ENST00000536310 343 ntBASIC-0.12□□□□□ -2.43
CHKB-CPT1BH3BT56 AL512605.2-201ENST00000592972 256 ntBASIC-0.12□□□□□ -2.43
CHKB-CPT1BH3BT56 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC-0.12□□□□□ -2.43
CHKB-CPT1BH3BT56 MIR1264-201ENST00000616374 69 ntBASIC-0.12□□□□□ -2.43
CHKB-CPT1BH3BT56 AL138955.1-201ENST00000622881 1040 ntBASIC-0.12□□□□□ -2.43
CHKB-CPT1BH3BT56 MIR924-201ENST00000638017 53 ntBASIC-0.12□□□□□ -2.43
CHKB-CPT1BH3BT56 MTND4P5-201ENST00000435821 1374 ntBASIC-0.12□□□□□ -2.43
CHKB-CPT1BH3BT56 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 AL161781.1-201ENST00000354277 403 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 MIR103A1-201ENST00000362165 78 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 MIR411-201ENST00000362239 96 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 SNORD116-13-201ENST00000384408 92 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 RNA5SP219-201ENST00000390940 113 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 SNORA75.2-201ENST00000391138 150 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 SNORA75.3-201ENST00000391231 150 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 AC068533.2-201ENST00000411872 306 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 MTCO3P41-201ENST00000414801 328 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 AC003071.1-201ENST00000451219 789 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 RPL39P36-201ENST00000490784 156 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 BLNK-209ENST00000495266 440 ntTSL 5 BASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 MTCO3P28-201ENST00000513351 515 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 RNU6-143P-201ENST00000516942 93 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 SNRPGP1-201ENST00000553864 222 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 AC090888.2-201ENST00000559765 1144 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 AC138915.2-201ENST00000569776 97 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 EIF1P4-201ENST00000572664 335 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 AL355816.2-201ENST00000610049 647 ntBASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.13□□□□□ -2.43
CHKB-CPT1BH3BT56 SNORA36.2-201ENST00000384004 127 ntBASIC-0.14□□□□□ -2.43
CHKB-CPT1BH3BT56 MIR140-201ENST00000385282 100 ntBASIC-0.14□□□□□ -2.43
CHKB-CPT1BH3BT56 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
CHKB-CPT1BH3BT56 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.14□□□□□ -2.43
CHKB-CPT1BH3BT56 SNORA70.12-201ENST00000516084 153 ntBASIC-0.14□□□□□ -2.43
CHKB-CPT1BH3BT56 AC106038.2-201ENST00000520706 568 ntBASIC-0.14□□□□□ -2.43
CHKB-CPT1BH3BT56 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.14□□□□□ -2.43
CHKB-CPT1BH3BT56 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC-0.14□□□□□ -2.43
CHKB-CPT1BH3BT56 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC-0.14□□□□□ -2.43
CHKB-CPT1BH3BT56 AL136520.1-202ENST00000555494 763 ntBASIC-0.14□□□□□ -2.43
CHKB-CPT1BH3BT56 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.14□□□□□ -2.43
CHKB-CPT1BH3BT56 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.14□□□□□ -2.43
CHKB-CPT1BH3BT56 BNIP3P9-201ENST00000603714 553 ntBASIC-0.14□□□□□ -2.43
CHKB-CPT1BH3BT56 MIR6513-201ENST00000621188 64 ntBASIC-0.14□□□□□ -2.43
CHKB-CPT1BH3BT56 RNA5SP264-201ENST00000363115 107 ntBASIC-0.15□□□□□ -2.43
CHKB-CPT1BH3BT56 RNU6-505P-201ENST00000384427 107 ntBASIC-0.15□□□□□ -2.43
CHKB-CPT1BH3BT56 RNU6-14P-201ENST00000384630 106 ntBASIC-0.15□□□□□ -2.43
CHKB-CPT1BH3BT56 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.15□□□□□ -2.43
CHKB-CPT1BH3BT56 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.15□□□□□ -2.43
CHKB-CPT1BH3BT56 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.15□□□□□ -2.43
CHKB-CPT1BH3BT56 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.15□□□□□ -2.43
CHKB-CPT1BH3BT56 MTCO2P1-201ENST00000424648 477 ntBASIC-0.15□□□□□ -2.43
CHKB-CPT1BH3BT56 AL591212.2-201ENST00000433923 257 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms