Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 AC022634.1-201ENST00000520765 532 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 FO082796.1-201ENST00000523795 183 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 AC023050.3-201ENST00000541142 333 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 AL157687.1-201ENST00000554853 619 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 AC021739.1-201ENST00000559631 174 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 AC174048.1-201ENST00000603389 144 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 AC021646.1-201ENST00000605469 484 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 RNU6-6P-201ENST00000606623 107 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 U2.15-201ENST00000611544 191 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 U2.16-201ENST00000613119 191 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 U2.12-201ENST00000613778 191 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 U2.20-201ENST00000613956 192 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 U2.9-201ENST00000615427 191 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 U2.11-201ENST00000616345 191 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 U2.2-201ENST00000616535 191 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 U2.3-201ENST00000617785 191 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 U2.19-201ENST00000618602 191 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 RNU2-1-201ENST00000618664 191 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 U2.6-201ENST00000619225 191 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 U2.5-201ENST00000619465 191 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 U2.10-201ENST00000620268 191 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 AC022418.1-201ENST00000624118 445 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 AC100810.6-201ENST00000638068 285 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 AC110491.1-201ENST00000562191 2010 ntBASIC1.91□□□□□ -2.1
TRIM49D1C9J1S8 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
TRIM49D1C9J1S8 Y_RNA.9-201ENST00000362354 101 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-428P-201ENST00000362942 107 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 Y_RNA.231-201ENST00000364358 102 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 SNORA6-201ENST00000384033 151 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 MIR301A-201ENST00000385261 86 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 RNU2-40P-201ENST00000410833 196 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 RN7SKP284-201ENST00000411002 343 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 RPL26P27-201ENST00000414397 437 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 TIMM9P3-201ENST00000428659 274 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 AL445646.1-201ENST00000431784 216 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 MTND3P21-201ENST00000433774 331 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 AL353705.4-201ENST00000449661 238 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 RPS29P21-201ENST00000496272 170 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 AL117351.2-201ENST00000513571 157 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-273P-201ENST00000516937 96 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 AC107953.1-201ENST00000522216 297 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 CENPUP1-201ENST00000526649 1202 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 SCOCP1-201ENST00000554676 349 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 MIR1273D-201ENST00000577266 86 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 MIR3942-201ENST00000585264 109 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 SNORD14A-201ENST00000606526 91 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 U4.5-201ENST00000617137 123 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 AL136221.1-201ENST00000621449 509 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 AC012640.5-201ENST00000623897 319 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 MIR219B-201ENST00000637023 88 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 AC010329.5-201ENST00000623497 2174 ntBASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.9□□□□□ -2.11
TRIM49D1C9J1S8 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 AC009487.4-201ENST00000624969 3585 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 SNORA3A-201ENST00000364113 130 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-72P-201ENST00000384285 79 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 AL355497.1-201ENST00000406262 551 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 MIR1277-201ENST00000408536 78 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 MIR1261-201ENST00000408659 82 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 U3.40-201ENST00000408706 208 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 RNU6-387P-201ENST00000411331 105 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 POLHP1-201ENST00000411806 470 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 DPH3P2-201ENST00000422618 250 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 MTCO2P30-201ENST00000503662 364 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 MIR892C-201ENST00000516410 77 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 AC104576.1-201ENST00000524225 88 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 AP005597.4-201ENST00000526762 229 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 MIR4782-201ENST00000577987 79 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 AC091152.3-201ENST00000604227 325 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 RMST_4.1-201ENST00000616886 107 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 MIR6134-201ENST00000617606 109 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 AC244517.12-201ENST00000623581 663 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 AL133216.2-202ENST00000634512 349 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 CDC27P3-201ENST00000635418 1910 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 ADAM3A-203ENST00000461344 2157 ntBASIC1.89□□□□□ -2.11
TRIM49D1C9J1S8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms