Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 Y_RNA.166-201ENST00000363730 102 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 Y_RNA.813-201ENST00000364639 102 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 Y_RNA.509-201ENST00000384506 99 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 MIR29B2-201ENST00000385055 81 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 MIR561-201ENST00000385216 97 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 HMGN2P35-201ENST00000412164 270 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.13□□□□□ -2.07
SRRM4A7MD48 AL117339.3-201ENST00000418733 162 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 MTCO3P46-201ENST00000425787 232 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.13□□□□□ -2.07
SRRM4A7MD48 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.13□□□□□ -2.07
SRRM4A7MD48 RNU6-1037P-201ENST00000459571 107 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 AC007547.1-201ENST00000462177 490 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 AC140059.1-201ENST00000489238 361 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 TRBVA-201ENST00000498804 316 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 AC022447.4-201ENST00000504053 364 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.13□□□□□ -2.07
SRRM4A7MD48 AK3P2-201ENST00000507976 429 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.13□□□□□ -2.07
SRRM4A7MD48 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.13□□□□□ -2.07
SRRM4A7MD48 SNORA19.2-201ENST00000516013 114 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 RNU7-30P-201ENST00000516835 62 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 AP005902.1-201ENST00000521358 186 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 SCOCP1-201ENST00000554676 349 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.13□□□□□ -2.07
SRRM4A7MD48 RPS3AP23-202ENST00000574601 686 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.13□□□□□ -2.07
SRRM4A7MD48 MIR4719-201ENST00000585233 84 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.13□□□□□ -2.07
SRRM4A7MD48 AL356055.1-201ENST00000602528 446 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 AL355297.2-201ENST00000604792 129 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 AC092807.2-201ENST00000609367 243 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 AL137790.1-201ENST00000634283 177 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.13□□□□□ -2.07
SRRM4A7MD48 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SRRM4A7MD48 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SRRM4A7MD48 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.12□□□□□ -2.07
SRRM4A7MD48 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SRRM4A7MD48 RNU6-212P-201ENST00000362642 104 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 Y_RNA.373-201ENST00000365600 103 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 Y_RNA.378-201ENST00000365652 113 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 MIR95-201ENST00000385072 81 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 RNA5SP210-201ENST00000391034 120 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 RN7SKP32-201ENST00000410167 303 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 RNU6-293P-201ENST00000411259 106 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 AL590556.1-201ENST00000423231 483 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.12□□□□□ -2.07
SRRM4A7MD48 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.12□□□□□ -2.07
SRRM4A7MD48 IFNA20P-201ENST00000436840 528 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.12□□□□□ -2.07
SRRM4A7MD48 RPL30P1-201ENST00000488676 339 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 AIG1P1-201ENST00000503376 148 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 AC103851.1-201ENST00000506833 274 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 SNORA25.11-201ENST00000515935 105 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 RNU4-49P-201ENST00000516080 140 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 RNA5SP367-201ENST00000516557 118 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 RNU6-1069P-201ENST00000516612 133 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 SNORA48.11-201ENST00000517015 89 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.12□□□□□ -2.07
SRRM4A7MD48 AC138761.3-201ENST00000579993 334 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 MIR4742-201ENST00000581069 85 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.12□□□□□ -2.07
SRRM4A7MD48 AL132765.2-201ENST00000610812 351 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 AC010297.1-201ENST00000623948 149 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 TPTEP1-208ENST00000636884 213 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 AP006437.1-201ENST00000641440 3685 ntBASIC2.12□□□□□ -2.07
SRRM4A7MD48 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.12□□□□□ -2.07
SRRM4A7MD48 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
SRRM4A7MD48 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SRRM4A7MD48 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SRRM4A7MD48 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SRRM4A7MD48 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SRRM4A7MD48 Y_RNA.100-201ENST00000363141 102 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 Y_RNA.167-201ENST00000363735 109 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 Y_RNA.184-201ENST00000363884 108 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 RNU6-1141P-201ENST00000364520 107 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 RNU4-56P-201ENST00000364700 142 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 RNU6-214P-201ENST00000384130 107 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 Y_RNA.535-201ENST00000384612 99 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 RNU6-1072P-201ENST00000384703 107 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 RNU6-443P-201ENST00000384780 107 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 MIR544A-201ENST00000384855 91 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 RNU6-510P-201ENST00000391239 108 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 MTND3P8-201ENST00000412909 339 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.11□□□□□ -2.07
SRRM4A7MD48 USP9YP20-201ENST00000419224 558 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.11□□□□□ -2.07
SRRM4A7MD48 AC011816.1-201ENST00000441346 546 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.11□□□□□ -2.07
SRRM4A7MD48 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.11□□□□□ -2.07
SRRM4A7MD48 AL121594.1-201ENST00000475906 575 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 AC083904.1-201ENST00000487828 231 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 AC090096.1-201ENST00000489168 390 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.11□□□□□ -2.07
SRRM4A7MD48 AC114801.2-201ENST00000503825 781 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 FAM206BP-201ENST00000510179 541 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.11□□□□□ -2.07
SRRM4A7MD48 RN7SKP132-201ENST00000516001 208 ntBASIC2.11□□□□□ -2.07
SRRM4A7MD48 Y_RNA.675-201ENST00000516389 149 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms