Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 AL021397.1-201ENST00000451806 248 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 RN7SKP210-201ENST00000459176 261 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 RNU6-261P-201ENST00000459506 102 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AC087884.1-201ENST00000469738 328 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 MED28P2-201ENST00000475771 317 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 RPL36AP48-201ENST00000485521 314 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 HMGB1P30-201ENST00000492455 606 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AC026801.1-201ENST00000497178 464 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AC091435.1-201ENST00000505442 584 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AC023141.11-201ENST00000508864 202 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 Y_RNA.655-201ENST00000515919 96 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 SNORA43.2-201ENST00000516652 128 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 RNU1-40P-201ENST00000516816 164 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 RNU1-97P-201ENST00000516872 164 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AP001893.2-201ENST00000526949 202 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AL137161.1-201ENST00000532231 390 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AL512360.1-201ENST00000555346 234 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AL118558.2-201ENST00000556294 238 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AC110588.1-201ENST00000559699 137 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AC025165.5-201ENST00000602802 578 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AL021997.1-201ENST00000605757 193 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AP001330.5-201ENST00000607176 411 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AC093788.1-201ENST00000609356 927 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AL359880.1-201ENST00000621879 266 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 AC099654.12-201ENST00000639868 649 ntBASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.78□□□□□ -2.12
NKX2-6A6NCS4 SNORD56.1-201ENST00000362913 68 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 RNU4-20P-201ENST00000365601 151 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 Y_RNA.516-201ENST00000384541 124 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 Y_RNA.554-201ENST00000384672 102 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 AL606923.1-201ENST00000406616 190 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 Y_RNA.595-201ENST00000410403 105 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 RNU6-1068P-201ENST00000410958 103 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 AC027124.2-201ENST00000428249 105 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 TPTE2P5-203ENST00000458118 728 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 AC025033.1-201ENST00000463883 194 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 AC019235.1-201ENST00000503847 207 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 RNU6-506P-201ENST00000516553 94 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 SNRPGP19-201ENST00000603826 189 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 RMST_4.1-201ENST00000616886 107 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 uc_338.34-201ENST00000617467 174 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 AL162373.1-201ENST00000620433 407 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 uc_338.20-201ENST00000621563 178 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 RMST_7.1-201ENST00000621935 268 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 AC022418.1-201ENST00000624118 445 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 AC138627.2-201ENST00000624202 601 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 Z75746.1-201ENST00000440243 2080 ntBASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
NKX2-6A6NCS4 AL359854.1-201ENST00000614203 1594 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 MTND4P27-201ENST00000450813 1354 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 AC138393.1-203ENST00000327086 343 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 RNU6-78P-201ENST00000362897 107 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 SNORA16B-201ENST00000364674 135 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 RNU6-434P-201ENST00000384376 107 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 RNU6-748P-201ENST00000384648 107 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 RNA5SP247-201ENST00000411181 105 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 DYNLL1P5-201ENST00000467158 270 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 AC083798.1-201ENST00000472671 131 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 RPL7P43-201ENST00000478876 753 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 AP001025.1-201ENST00000486139 332 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 MTAPP1-201ENST00000489154 819 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 AC140059.1-201ENST00000489238 361 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 RNU6-720P-201ENST00000516363 108 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 Y_RNA.693-201ENST00000516641 110 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 RNU6-835P-201ENST00000516974 104 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 MTND4P7-201ENST00000523876 130 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 AP004607.1-201ENST00000524456 203 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 AP003034.1-201ENST00000534621 422 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 AC023043.2-201ENST00000589678 1026 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 AC244517.12-201ENST00000623581 663 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 AC139792.2-201ENST00000624218 587 ntBASIC1.76□□□□□ -2.13
NKX2-6A6NCS4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 Y_RNA.38-201ENST00000362617 102 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 RNU6-428P-201ENST00000362942 107 ntBASIC1.75□□□□□ -2.13
NKX2-6A6NCS4 RNU6-529P-201ENST00000363383 104 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms