Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.79□□□□□ -1.96
TCRBV7S3A2A0A539 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 AC110774.1-201ENST00000623567 2018 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 Y_RNA.2-201ENST00000362330 96 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 SNORD50.1-201ENST00000362987 71 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 Y_RNA.395-201ENST00000383945 109 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 RNU6-1227P-201ENST00000383981 107 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 RNU6-1222P-201ENST00000384615 107 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 RNU6-1011P-201ENST00000384668 107 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 MIR147B-201ENST00000390185 80 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 BTF3L4P2-201ENST00000392798 346 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 AL354751.2-201ENST00000415471 210 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 AC011816.1-201ENST00000441346 546 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 AC012308.1-201ENST00000451232 178 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 AC079600.2-201ENST00000550076 130 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 BNIP3P22-201ENST00000593399 556 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 AL355877.2-201ENST00000603670 358 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 AL080274.1-201ENST00000605565 220 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 AC090971.5-201ENST00000621102 293 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 AC002064.3-201ENST00000623448 346 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 AC099654.7-201ENST00000635788 2127 ntBASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TCRBV7S3A2A0A539 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 Y_RNA.197-201ENST00000364004 102 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 RNU1-112P-201ENST00000364401 164 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 RNU6-1141P-201ENST00000364520 107 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 XGY1-201ENST00000381172 446 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 RNU6-1040P-201ENST00000383974 107 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 RNU6-890P-201ENST00000384121 107 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 RNU6-331P-201ENST00000384724 107 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 MIR544A-201ENST00000384855 91 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 UBA52P6-201ENST00000399822 382 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 CYCSP48-201ENST00000417124 323 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 Z82205.1-201ENST00000428456 297 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 MTCYBP6-201ENST00000441810 138 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 AC079354.2-201ENST00000453523 154 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 RAC1P5-201ENST00000512182 576 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 RN7SKP57-201ENST00000517248 293 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 AC109329.1-201ENST00000518744 317 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 ELOCP31-201ENST00000540463 467 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 MIR4273-201ENST00000582824 84 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 RPS15AP11-201ENST00000594193 385 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 AC007179.3-201ENST00000604976 235 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 AC096772.1-201ENST00000609146 564 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 AC009318.2-201ENST00000610917 651 ntBASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.77□□□□□ -1.97
TCRBV7S3A2A0A539 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 AC002543.1-201ENST00000299783 1954 ntBASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 RNU6-1010P-201ENST00000362757 107 ntBASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 RNU6-1285P-201ENST00000363480 105 ntBASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 RN7SKP61-201ENST00000410642 295 ntBASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 BX276092.3-201ENST00000424182 230 ntBASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 MTCO2P12-201ENST00000427426 682 ntBASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 SCARNA16.2-201ENST00000516520 172 ntBASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 AC096577.2-201ENST00000611455 153 ntBASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 AL159153.1-201ENST00000619688 317 ntBASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 UCA1.1-201ENST00000620952 75 ntBASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 AC092608.2-201ENST00000624427 218 ntBASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 MTND5P9-201ENST00000503854 1755 ntBASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 AL109809.4-201ENST00000603520 2185 ntBASIC2.76□□□□□ -1.97
TCRBV7S3A2A0A539 MIR23B-201ENST00000384832 97 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 U3.26-201ENST00000391236 204 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 MIR1302-11-201ENST00000408051 138 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 MIR1302-9-201ENST00000408365 138 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 MIR1302-10-201ENST00000408734 138 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 RNU2-23P-201ENST00000410545 195 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 EIF1AXP1-201ENST00000419267 435 ntBASIC2.75□□□□□ -1.97
TCRBV7S3A2A0A539 AC243428.1-201ENST00000421099 264 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms