Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 AC027514.1-201ENST00000588561 1603 ntBASIC0.23□□□□□ -2.37
TRAV12-3A0A0B4J271 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.23□□□□□ -2.37
TRAV12-3A0A0B4J271 AL442644.1-201ENST00000454390 3105 ntBASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 U6.112-201ENST00000384129 70 ntBASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 MIR301A-201ENST00000385261 86 ntBASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 RNU6-1054P-201ENST00000411293 104 ntBASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 AC013262.1-201ENST00000426710 252 ntBASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 MTCO3P18-201ENST00000440206 761 ntBASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 RPL7P55-201ENST00000450522 746 ntBASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 AC002350.1-201ENST00000490759 375 ntBASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 MTCO3P7-201ENST00000510008 774 ntBASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 AC005741.1-201ENST00000511094 432 ntBASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 RNU6-496P-201ENST00000516145 99 ntBASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 AC092325.1-201ENST00000566449 554 ntBASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 AC122134.1-202ENST00000569111 1201 ntBASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 AL358072.1-201ENST00000604156 575 ntBASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 AC007792.1-201ENST00000623023 402 ntBASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 AP000676.3-201ENST00000623299 569 ntBASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 AL512643.1-201ENST00000635735 524 ntBASIC0.22□□□□□ -2.37
TRAV12-3A0A0B4J271 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 RNU6-862P-201ENST00000362804 105 ntBASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 RNU1-133P-201ENST00000364867 167 ntBASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 RNU6-945P-201ENST00000383947 107 ntBASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 RNU6-817P-201ENST00000391083 104 ntBASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 MIR942-201ENST00000401111 86 ntBASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 AL031577.2-201ENST00000404133 280 ntBASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 AL590556.1-201ENST00000423231 483 ntBASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 SEPT14P24-201ENST00000447236 180 ntBASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 RNU6-1132P-201ENST00000459214 107 ntBASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 RPL39P38-201ENST00000467018 153 ntBASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 AC048334.1-201ENST00000477975 159 ntBASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 AC026414.1-201ENST00000504046 698 ntBASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 RNU6-405P-201ENST00000516637 110 ntBASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 RNU6-467P-201ENST00000517027 110 ntBASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 BNIP3P8-201ENST00000597863 560 ntBASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 AC098483.2-201ENST00000603158 454 ntBASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 KATNBL1P5-201ENST00000605015 517 ntBASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 AL158163.2-201ENST00000619110 700 ntBASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
TRAV12-3A0A0B4J271 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 AL079343.1-201ENST00000572358 1771 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 SNORD32B-201ENST00000364460 84 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 RNU6-969P-201ENST00000383900 105 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 RNU6-1122P-201ENST00000384449 107 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 Y_RNA.534-201ENST00000384599 112 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 RNU6-1025P-201ENST00000410629 104 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 MTCO3P29-201ENST00000432119 779 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 AL591704.1-201ENST00000432574 275 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 MTCO3P43-201ENST00000440974 771 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 MTND4P25-201ENST00000441039 533 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 MTND1P3-201ENST00000484956 952 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 AC104806.1-201ENST00000508720 308 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 MIR449C-201ENST00000516047 92 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 RNA5SP220-201ENST00000516298 104 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 RNU6-1315P-201ENST00000517187 99 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 AC092451.2-201ENST00000538746 658 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 AC060771.1-201ENST00000582031 164 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 MIR4293-201ENST00000584305 78 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 MIR6734-201ENST00000621166 68 ntBASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.2□□□□□ -2.38
TRAV12-3A0A0B4J271 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 RNU6-1123P-201ENST00000362347 106 ntBASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 RNU6-1284P-201ENST00000363701 100 ntBASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 Y_RNA.363-201ENST00000365529 113 ntBASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 RNU6-744P-201ENST00000365557 107 ntBASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 VTRNA1-3-201ENST00000365645 89 ntBASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 RNU6-1316P-201ENST00000384242 108 ntBASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 AF228730.1-201ENST00000397972 663 ntBASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 MIR936-201ENST00000401264 98 ntBASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 RNU2-42P-201ENST00000410697 113 ntBASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 COX6CP10-201ENST00000416832 224 ntBASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 MTCYBP5-201ENST00000423752 1135 ntBASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 AC069257.2-201ENST00000441819 155 ntBASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 ATP5J2P3-201ENST00000451550 258 ntBASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 RPL18AP17-201ENST00000455326 198 ntBASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 RNU7-59P-201ENST00000459101 61 ntBASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 BNIP3P6-201ENST00000549284 499 ntBASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 MIR4711-201ENST00000578274 70 ntBASIC0.19□□□□□ -2.38
TRAV12-3A0A0B4J271 SNORD3E-201ENST00000362899 217 ntBASIC0.18□□□□□ -2.38
TRAV12-3A0A0B4J271 RNU6-792P-201ENST00000363490 107 ntBASIC0.18□□□□□ -2.38
TRAV12-3A0A0B4J271 SNORA4.3-201ENST00000365564 137 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms