Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC073539.2-201ENST00000597113 165 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AL353778.1-201ENST00000603149 408 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AC105129.3-201ENST00000605455 485 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AL139286.2-201ENST00000606838 396 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AC026585.1-201ENST00000619582 524 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AC120349.3-201ENST00000624377 529 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AC010608.3-201ENST00000625048 527 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AP000720.1-201ENST00000625091 483 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AC008993.2-201ENST00000631744 806 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AC068205.3-201ENST00000636385 468 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AL445984.1-201ENST00000637834 659 ntBASIC0.92□□□□□ -2.26
TRAV41A0A0B4J266 AC091812.1-201ENST00000432235 1948 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 Y_RNA.18-201ENST00000362461 102 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 SNORA62.1-201ENST00000364287 154 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 SNORD32B-201ENST00000364460 84 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 RNU6-533P-201ENST00000384144 107 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 RPL21P90-201ENST00000415692 466 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 CR769776.1-201ENST00000441254 787 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 HMGN2P18-201ENST00000450680 270 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 ART2BP-201ENST00000453501 499 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 RPS29P29-201ENST00000456396 171 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 RPL30P7-201ENST00000479312 323 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 AC093852.1-201ENST00000503587 266 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 TRMT112P2-201ENST00000512910 132 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 RNU6-1053P-201ENST00000515930 101 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 MTND4LP18-201ENST00000526864 291 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 AP002453.2-201ENST00000533503 320 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 RRN3P3-201ENST00000549207 578 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 AC091489.2-201ENST00000566263 604 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 SNORA77B-201ENST00000578179 125 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 AL031281.1-201ENST00000604049 488 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 AC092140.2-201ENST00000618027 521 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 AC091895.1-201ENST00000624494 256 ntBASIC0.91□□□□□ -2.26
TRAV41A0A0B4J266 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 RNU4-15P-201ENST00000362613 141 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 RNU5F-6P-201ENST00000362979 116 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-112P-201ENST00000363599 104 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-414P-201ENST00000363705 104 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 Y_RNA.332-201ENST00000365271 113 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-61P-201ENST00000365528 109 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-296P-201ENST00000384608 107 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 MIR558-201ENST00000384920 94 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 MIR1267-201ENST00000408723 78 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 RNU2-3P-201ENST00000410144 191 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 AL591704.2-201ENST00000421658 181 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 AC139712.2-201ENST00000424302 339 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 FTH1P25-201ENST00000447665 469 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 DUXAP8-207ENST00000456786 622 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 AC112204.1-201ENST00000502591 103 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 MTND2P33-201ENST00000506452 1031 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 AC104806.1-201ENST00000508720 308 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 MTND3P25-201ENST00000509243 135 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-1220P-201ENST00000517126 108 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 RAB11AP2-201ENST00000545905 639 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 RPL21P5-201ENST00000554662 472 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 MTND4P33-201ENST00000556706 766 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 MIR5697-201ENST00000578045 78 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 BNIP3P10-201ENST00000605360 577 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 AL050343.2-201ENST00000607338 280 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 RMST_4.1-201ENST00000616886 107 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 AC130454.1-201ENST00000622948 401 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 AL359740.1-201ENST00000624340 592 ntBASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV41A0A0B4J266 MTND4P9-201ENST00000507819 1346 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 LINC02555-201ENST00000563933 1951 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-1285P-201ENST00000363480 105 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 SNORA25.8-201ENST00000364831 128 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 MIR544A-201ENST00000384855 91 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 RAP1BP3-201ENST00000407180 549 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 RNU6-321P-201ENST00000410912 106 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 CYCSP33-201ENST00000414485 327 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 MTND1P30-201ENST00000441241 901 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 AL606662.1-201ENST00000445763 553 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 AC006026.2-201ENST00000457376 180 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 AL049829.1-201ENST00000465411 156 ntBASIC0.89□□□□□ -2.27
TRAV41A0A0B4J266 AC005840.1-201ENST00000498412 377 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms