Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USP16Q9Y5T5 RNU6-116P-201ENST00000384042 109 ntBASIC2.04□□□□□ -2.08
USP16Q9Y5T5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
USP16Q9Y5T5 RNU6-550P-201ENST00000391057 101 ntBASIC2.04□□□□□ -2.08
USP16Q9Y5T5 FTH1P15-201ENST00000406984 280 ntBASIC2.04□□□□□ -2.08
USP16Q9Y5T5 MIR1323-201ENST00000408090 73 ntBASIC2.04□□□□□ -2.08
USP16Q9Y5T5 RNU2-40P-201ENST00000410833 196 ntBASIC2.04□□□□□ -2.08
USP16Q9Y5T5 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.04□□□□□ -2.08
USP16Q9Y5T5 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.04□□□□□ -2.08
USP16Q9Y5T5 AL031779.1-201ENST00000415663 330 ntBASIC2.04□□□□□ -2.08
USP16Q9Y5T5 RPL21P90-201ENST00000415692 466 ntBASIC2.04□□□□□ -2.08
USP16Q9Y5T5 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.04□□□□□ -2.08
USP16Q9Y5T5 MTND4P32-201ENST00000437189 1237 ntBASIC2.04□□□□□ -2.08
USP16Q9Y5T5 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.04□□□□□ -2.08
USP16Q9Y5T5 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.04□□□□□ -2.08
USP16Q9Y5T5 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.04□□□□□ -2.08
USP16Q9Y5T5 AL360271.2-201ENST00000447710 161 ntBASIC2.04□□□□□ -2.08
USP16Q9Y5T5 MTND1P18-201ENST00000448191 573 ntBASIC2.04□□□□□ -2.08
USP16Q9Y5T5 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.04□□□□□ -2.08
USP16Q9Y5T5 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.04□□□□□ -2.08
USP16Q9Y5T5 MIR4528-201ENST00000577763 90 ntBASIC2.04□□□□□ -2.08
USP16Q9Y5T5 MIR4775-201ENST00000581168 75 ntBASIC2.04□□□□□ -2.08
USP16Q9Y5T5 AL161423.1-201ENST00000613700 262 ntBASIC2.04□□□□□ -2.08
USP16Q9Y5T5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.04□□□□□ -2.08
USP16Q9Y5T5 AC024581.2-201ENST00000619986 252 ntBASIC2.04□□□□□ -2.08
USP16Q9Y5T5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.04□□□□□ -2.08
USP16Q9Y5T5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
USP16Q9Y5T5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
USP16Q9Y5T5 RNU6-1120P-201ENST00000362988 108 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 RNU4-13P-201ENST00000364019 141 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 RNU6-282P-201ENST00000365357 103 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 RNU6-1042P-201ENST00000384204 107 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 RNU6-348P-201ENST00000384386 107 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 MIR1-2-201ENST00000384961 85 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 AL133475.1-201ENST00000404414 305 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 CIR1P3-201ENST00000405137 479 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 RN7SKP101-201ENST00000411376 320 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 AC138623.1-201ENST00000418060 216 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 MTCO2P34-201ENST00000421994 607 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 BX510359.4-201ENST00000423750 193 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 AL451074.3-201ENST00000437709 472 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 AC016691.1-201ENST00000441321 413 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.03□□□□□ -2.08
USP16Q9Y5T5 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.03□□□□□ -2.08
USP16Q9Y5T5 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.03□□□□□ -2.08
USP16Q9Y5T5 LRRC34P2-201ENST00000514850 553 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 CBX3P7-201ENST00000532876 502 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 AL133241.1-201ENST00000556832 487 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 AC103987.3-201ENST00000582071 292 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 BNIP3P30-201ENST00000601184 574 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 AL109918.3-201ENST00000603072 338 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 AC026585.1-201ENST00000619582 524 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 AC022079.1-201ENST00000621546 602 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 AC011155.2-201ENST00000623202 216 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 AC005609.4-201ENST00000625071 447 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 AC090582.1-201ENST00000636321 199 ntBASIC2.03□□□□□ -2.08
USP16Q9Y5T5 SNORD114-19-201ENST00000363072 75 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 RNA5SP240-201ENST00000365355 128 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 RNU6-1029P-201ENST00000384109 107 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 RNU5A-6P-201ENST00000384136 116 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 SNORA75-201ENST00000384158 137 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 RNU6-843P-201ENST00000384454 104 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 RNU6-45P-201ENST00000384471 107 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.02□□□□□ -2.09
USP16Q9Y5T5 MTATP6P18-201ENST00000417994 673 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 EIF4EP4-201ENST00000424916 578 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 AC073464.1-201ENST00000429823 534 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 MTCO2P16-201ENST00000436962 677 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.02□□□□□ -2.09
USP16Q9Y5T5 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.02□□□□□ -2.09
USP16Q9Y5T5 AC132479.1-201ENST00000449160 144 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.02□□□□□ -2.09
USP16Q9Y5T5 CYP2C59P-201ENST00000457790 269 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 RPS29P15-201ENST00000458329 171 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 AC112771.1-201ENST00000463581 102 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 RPS3AP17-201ENST00000472594 777 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.02□□□□□ -2.09
USP16Q9Y5T5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.02□□□□□ -2.09
USP16Q9Y5T5 AC105417.1-201ENST00000514691 285 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 Y_RNA.687-201ENST00000516558 91 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 CR383656.8-201ENST00000549046 145 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 PSMA3P-201ENST00000555485 635 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 AC024614.2-201ENST00000577584 372 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 NBR2-204ENST00000587322 63 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 AC008749.1-201ENST00000597650 306 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 AC008536.2-201ENST00000607284 349 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 AL512598.1-201ENST00000610158 273 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.02□□□□□ -2.09
USP16Q9Y5T5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
USP16Q9Y5T5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
USP16Q9Y5T5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
USP16Q9Y5T5 RNU6-371P-201ENST00000364283 108 ntBASIC2.01□□□□□ -2.09
USP16Q9Y5T5 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
USP16Q9Y5T5 SNORD116-2-201ENST00000384274 95 ntBASIC2.01□□□□□ -2.09
USP16Q9Y5T5 SNORD116-6-201ENST00000384711 96 ntBASIC2.01□□□□□ -2.09
USP16Q9Y5T5 RNU2-29P-201ENST00000410423 189 ntBASIC2.01□□□□□ -2.09
USP16Q9Y5T5 OR9R1P-201ENST00000412200 877 ntBASIC2.01□□□□□ -2.09
USP16Q9Y5T5 MTCO2P11-201ENST00000431069 680 ntBASIC2.01□□□□□ -2.09
USP16Q9Y5T5 AL358934.1-201ENST00000432346 324 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms