Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 MIR148B-201ENST00000362252 99 ntBASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 MIR422A-201ENST00000362286 90 ntBASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 RNU6-601P-201ENST00000384540 107 ntBASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 AC096664.2-201ENST00000411843 406 ntBASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 AC008267.5-201ENST00000424928 265 ntBASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 Z82205.1-201ENST00000428456 297 ntBASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 AC104564.1-201ENST00000493028 407 ntBASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 RNU6-567P-201ENST00000516746 107 ntBASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 AC021231.3-201ENST00000558497 370 ntBASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 AL359198.2-201ENST00000611836 194 ntBASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 Y_RNA.804-201ENST00000615262 101 ntBASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 MIR622-201ENST00000638396 96 ntBASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL4A3BPQ9Y5P4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 Y_RNA.40-201ENST00000362645 93 ntBASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 RNU6-867P-201ENST00000364956 107 ntBASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 Y_RNA.504-201ENST00000384481 104 ntBASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 SNORD15B-201ENST00000384714 146 ntBASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 MT-TD-201ENST00000387419 68 ntBASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 AIMP1P2-201ENST00000425294 312 ntBASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 GPM6BP3-201ENST00000442797 145 ntBASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 CYP2C59P-201ENST00000457790 269 ntBASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 AC008571.1-201ENST00000467232 300 ntBASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 CKS1BP2-201ENST00000497342 240 ntBASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 RNU6-507P-201ENST00000516045 100 ntBASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 AC245166.1-201ENST00000521012 253 ntBASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 AC090616.3-201ENST00000582184 217 ntBASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 AC009994.1-201ENST00000606889 253 ntBASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 MIR5739-201ENST00000619803 80 ntBASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.46□□□□□ -1.86
COL4A3BPQ9Y5P4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 Y_RNA.70-201ENST00000362886 110 ntBASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 Y_RNA.123-201ENST00000363338 102 ntBASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 RNU6-596P-201ENST00000365395 98 ntBASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 RNU6-220P-201ENST00000390919 107 ntBASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 AL590135.1-201ENST00000422215 156 ntBASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 AL590556.1-201ENST00000423231 483 ntBASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 AC019205.3-201ENST00000424573 156 ntBASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 AC016700.2-201ENST00000446011 156 ntBASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 AC015911.1-201ENST00000495111 156 ntBASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 AC008885.1-201ENST00000514930 301 ntBASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 AC109329.2-201ENST00000519658 482 ntBASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 AC113139.1-201ENST00000605049 239 ntBASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 AC008121.3-201ENST00000618726 433 ntBASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL4A3BPQ9Y5P4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 AC093908.1-201ENST00000623125 8092 ntBASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 RNU5E-4P-201ENST00000364931 120 ntBASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 RNU6-784P-201ENST00000384330 106 ntBASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 SNORA26.3-201ENST00000391119 136 ntBASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 AL591034.2-201ENST00000402839 359 ntBASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 NDUFB4P4-201ENST00000404822 243 ntBASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 AL138885.1-201ENST00000405921 675 ntBASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 Y_RNA.604-201ENST00000410574 102 ntBASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 RNU2-63P-201ENST00000410792 194 ntBASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 EIF4EP2-201ENST00000422816 654 ntBASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 SNORD5.1-201ENST00000458800 75 ntBASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 S100A11P2-201ENST00000467589 312 ntBASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 AC091826.1-201ENST00000514065 313 ntBASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 RNU5F-2P-201ENST00000516066 82 ntBASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 SNORD98-201ENST00000636377 67 ntBASIC3.44□□□□□ -1.86
COL4A3BPQ9Y5P4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 RNA5SP240-201ENST00000365355 128 ntBASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 Y_RNA.384-201ENST00000383909 102 ntBASIC3.43□□□□□ -1.86
COL4A3BPQ9Y5P4 SNORA54-201ENST00000384281 123 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms