Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 AC110588.1-201ENST00000559699 137 ntBASIC3.53□□□□□ -1.84
PCDHA9Q9Y5H5 AC087499.8-201ENST00000578406 226 ntBASIC3.53□□□□□ -1.84
PCDHA9Q9Y5H5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
PCDHA9Q9Y5H5 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.53□□□□□ -1.84
PCDHA9Q9Y5H5 AL391261.4-201ENST00000616012 481 ntBASIC3.53□□□□□ -1.84
PCDHA9Q9Y5H5 AC130454.1-201ENST00000622948 401 ntBASIC3.53□□□□□ -1.84
PCDHA9Q9Y5H5 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDHA9Q9Y5H5 AC007256.1-201ENST00000392253 2765 ntBASIC3.53□□□□□ -1.84
PCDHA9Q9Y5H5 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHA9Q9Y5H5 AC058791.1-201ENST00000608412 3198 ntBASIC3.53□□□□□ -1.85
PCDHA9Q9Y5H5 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.53□□□□□ -1.85
PCDHA9Q9Y5H5 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 OR56A5-201ENST00000340110 738 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 RNU6-222P-201ENST00000362438 107 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 Y_RNA.19-201ENST00000362462 99 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 RNU6-1301P-201ENST00000362724 104 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 RNU1-64P-201ENST00000365443 163 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 RNA5SP213-201ENST00000391031 106 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 AC017083.1-201ENST00000428093 483 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 BX679664.1-201ENST00000434429 253 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 RPS29P7-201ENST00000439662 171 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 AP000870.1-201ENST00000472927 406 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 AC010469.2-201ENST00000496412 480 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 GZMAP1-201ENST00000503054 631 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 RNU6-711P-201ENST00000517255 106 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 AC022868.1-201ENST00000517767 391 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 IGHV3-76-201ENST00000522465 295 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 AC027288.2-201ENST00000553028 243 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 MIR5685-201ENST00000579080 79 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 AC125232.2-201ENST00000592457 143 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 U6.92-201ENST00000636464 89 ntBASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHA9Q9Y5H5 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 SNORD114-19-201ENST00000363072 75 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 Y_RNA.319-201ENST00000365138 92 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 SNORA36A-201ENST00000384221 132 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 EI24P2-201ENST00000397776 1076 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 RN7SKP156-201ENST00000410308 342 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 RNU6-130P-201ENST00000411112 103 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 AC138623.1-201ENST00000418060 216 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 AL590135.1-201ENST00000422215 156 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 AL139247.1-201ENST00000422768 325 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 AC019205.3-201ENST00000424573 156 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 snoU13.14-201ENST00000459372 104 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 AL133162.1-201ENST00000463228 453 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 RPL23AP62-201ENST00000463396 453 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 AIG1P1-201ENST00000503376 148 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 RNU6-397P-201ENST00000516226 104 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 AP006245.1-201ENST00000522549 120 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 MIR5187-201ENST00000583479 76 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 uc_338.14-201ENST00000613162 166 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 U6.104-201ENST00000637979 90 ntBASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHA9Q9Y5H5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 MAPK10-322ENST00000641485 4530 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 Y_RNA.188-201ENST00000363952 111 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 Y_RNA.222-201ENST00000364264 102 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 Y_RNA.439-201ENST00000384119 94 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 RNU6-159P-201ENST00000391080 106 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 UBA52P6-201ENST00000399822 382 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 AC096638.1-201ENST00000444678 216 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 PCNPP5-201ENST00000452246 481 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 AC090525.1-201ENST00000479116 478 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 RNU6-408P-201ENST00000515910 100 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 RNU6-1012P-201ENST00000516606 109 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 SNORD59.2-201ENST00000516873 68 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 RNA5SP54-201ENST00000516951 92 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 RNU6-58P-201ENST00000517143 103 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 AC008011.1-201ENST00000545989 227 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 VN1R85P-201ENST00000601587 426 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 AL078605.1-201ENST00000603529 500 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 RNU1-30P-201ENST00000606575 163 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 Y_RNA.772-201ENST00000606692 102 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 AC062037.2-201ENST00000610137 73 ntBASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHA9Q9Y5H5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHA9Q9Y5H5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms