Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU6-1115P-201ENST00000362490 106 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU6-1285P-201ENST00000363480 105 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 Y_RNA.463-201ENST00000384271 102 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 Y_RNA.533-201ENST00000384596 114 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 DBIP2-201ENST00000419076 262 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 AC007098.1-201ENST00000420122 367 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 GPM6BP3-201ENST00000442797 145 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 AL137792.2-201ENST00000443484 235 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 MIR2053-201ENST00000459295 91 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 snoU13.14-201ENST00000459372 104 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU7-175P-201ENST00000515915 61 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU6-1153P-201ENST00000516760 105 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU7-4P-201ENST00000516961 62 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU6-988P-201ENST00000519081 107 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 MIR4765-201ENST00000585007 77 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 AC060766.3-201ENST00000591442 263 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 SNRPGP17-201ENST00000603780 214 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 Y_RNA.812-201ENST00000610788 101 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 Y_RNA.784-201ENST00000613803 101 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 Y_RNA.787-201ENST00000616522 101 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 Y_RNA.780-201ENST00000617336 101 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 AC007742.2-201ENST00000618226 398 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 Y_RNA.801-201ENST00000619005 101 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 PWAR6-201ENST00000552334 4618 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 AC010329.5-201ENST00000623497 2174 ntBASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA6Q9Y5G7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 OR56A5-201ENST00000340110 738 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU6-529P-201ENST00000363383 104 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 Y_RNA.138-201ENST00000363462 102 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 SNORA38.1-201ENST00000364172 131 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 Y_RNA.504-201ENST00000384481 104 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 AC097463.2-201ENST00000421074 142 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 AL035666.1-201ENST00000446195 348 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 AL353705.4-201ENST00000449661 238 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 SNRPGP7-201ENST00000469016 106 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 RPS29P2-201ENST00000479278 136 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 AC025518.1-201ENST00000479856 347 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 RPS4XP22-201ENST00000480755 780 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 AC104581.2-201ENST00000572227 430 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 MIR5571-201ENST00000577998 113 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 AC011471.1-201ENST00000585766 187 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 AC008739.2-201ENST00000597006 317 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 AC073410.2-201ENST00000603240 332 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 AC005014.2-201ENST00000607795 599 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 AL159153.1-201ENST00000619688 317 ntBASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHGA6Q9Y5G7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 AC092435.3-201ENST00000565538 3654 ntBASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU6-1159P-201ENST00000362933 107 ntBASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU6-486P-201ENST00000363116 107 ntBASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU1-115P-201ENST00000365329 160 ntBASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 Y_RNA.394-201ENST00000383942 103 ntBASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU6-474P-201ENST00000384243 107 ntBASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 RNU1-57P-201ENST00000384491 166 ntBASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 MIR625-201ENST00000385047 85 ntBASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 U3.39-201ENST00000408569 239 ntBASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 AC018865.2-201ENST00000423631 129 ntBASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 AIG1P1-201ENST00000503376 148 ntBASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 MTND4LP22-201ENST00000508209 276 ntBASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 MRPS36P2-201ENST00000512569 299 ntBASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 SCARNA13-201ENST00000516672 275 ntBASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 AC091144.1-201ENST00000519573 138 ntBASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 AC026333.2-201ENST00000542164 106 ntBASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 AC020661.2-201ENST00000560114 134 ntBASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 MIR5701-3-201ENST00000578890 82 ntBASIC3.29□□□□□ -1.88
PCDHGA6Q9Y5G7 MIR3171-201ENST00000584270 74 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 183 ms