Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC097372.5-201ENST00000623665 376 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 AC007496.3-201ENST00000624987 3443 ntBASIC3.34□□□□□ -1.87
PCDHB1Q9Y5F3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHB1Q9Y5F3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.88
PCDHB1Q9Y5F3 AC008669.1-201ENST00000565823 2178 ntBASIC3.34□□□□□ -1.88
PCDHB1Q9Y5F3 ZNF299P-201ENST00000406845 1804 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 AP002088.1-201ENST00000382740 395 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 RNU6-1032P-201ENST00000384100 107 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 RNU6-750P-201ENST00000390946 107 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 RNU6-985P-201ENST00000410182 104 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 AC243428.1-201ENST00000421099 264 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 NUP35P1-201ENST00000422734 947 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 AC007969.2-201ENST00000441891 191 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 AC107626.1-201ENST00000471084 183 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 FO393415.2-201ENST00000480085 343 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 SNORD116.3-201ENST00000517176 78 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 SNORA31.23-201ENST00000517219 133 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 MIR4513-201ENST00000581077 86 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 AC006386.2-201ENST00000624491 75 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 AC012005.1-201ENST00000624575 75 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 AL078596.1-201ENST00000624856 447 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 AC010889.1-201ENST00000566193 2666 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 AC093908.1-201ENST00000623125 8092 ntBASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
PCDHB1Q9Y5F3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 RNY1P16-201ENST00000363063 111 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 RNA5SP197-201ENST00000363357 119 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 Y_RNA.364-201ENST00000365532 101 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 RNU6-196P-201ENST00000384315 107 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 RNU6-748P-201ENST00000384648 107 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 MIR548F4-201ENST00000408515 105 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 RNU2-49P-201ENST00000410666 184 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 BX679664.1-201ENST00000434429 253 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 Z75741.1-201ENST00000446793 314 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 RNU5B-3P-201ENST00000516601 115 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 CKS1BP7-201ENST00000522230 235 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 CBX3P8-201ENST00000532412 525 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 AL117187.1-201ENST00000555482 181 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 AC010653.1-201ENST00000571108 881 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 MIR3186-201ENST00000577404 85 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 7SK.7-201ENST00000603504 247 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 RNU6-91P-201ENST00000607774 107 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 AL162274.2-201ENST00000614406 332 ntBASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHB1Q9Y5F3 GABRG2-229ENST00000641017 3628 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 SNORD50.1-201ENST00000362987 71 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 Y_RNA.80-201ENST00000362996 102 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 Y_RNA.123-201ENST00000363338 102 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 Y_RNA.158-201ENST00000363651 101 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 RNU6-595P-201ENST00000363944 107 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 RNU1-115P-201ENST00000365329 160 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 Y_RNA.485-201ENST00000384395 102 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 Y_RNA.577-201ENST00000384794 101 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 RNA5SP354-201ENST00000391247 136 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 EI24P2-201ENST00000397776 1076 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 HMGB3P2-201ENST00000411913 584 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 EIF1AXP1-201ENST00000419267 435 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 MRPS18CP6-201ENST00000423587 223 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 RPS4XP22-201ENST00000480755 780 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.31□□□□□ -1.88
PCDHB1Q9Y5F3 SNORA25.10-201ENST00000515926 124 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms