Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 RNU6-199P-201ENST00000362954 107 ntBASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 Y_RNA.172-201ENST00000363765 102 ntBASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 SNORD87-201ENST00000364849 89 ntBASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 AC004866.1-201ENST00000411748 78 ntBASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 RPL23AP58-201ENST00000440453 469 ntBASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 AC107626.1-201ENST00000471084 183 ntBASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 AC007224.1-201ENST00000564410 144 ntBASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 TCL6_2.1-201ENST00000615162 119 ntBASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 AC005562.2-201ENST00000618264 111 ntBASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 AC018692.3-201ENST00000623929 123 ntBASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 AC011944.2-201ENST00000624440 683 ntBASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 AC008873.1-201ENST00000625051 138 ntBASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 AC068205.3-201ENST00000636385 468 ntBASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 OR14L1P-202ENST00000641545 3009 ntBASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
PCDHB11Q9Y5F2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 OR51H2P-202ENST00000641424 3046 ntBASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 RNU6-1048P-201ENST00000364054 107 ntBASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 Y_RNA.243-201ENST00000364481 109 ntBASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 Y_RNA.368-201ENST00000365547 113 ntBASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 Y_RNA.420-201ENST00000384043 110 ntBASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 MIR616-201ENST00000385293 97 ntBASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 RNU6-1211P-201ENST00000459179 105 ntBASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 RN7SL303P-201ENST00000469773 251 ntBASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 RN7SL132P-201ENST00000478131 296 ntBASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 RN7SL817P-201ENST00000480777 288 ntBASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 SCARNA8-201ENST00000515924 131 ntBASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 RNU6-1234P-201ENST00000516877 103 ntBASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 IGKV2D-19-201ENST00000523346 262 ntBASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 AP004242.1-201ENST00000533701 349 ntBASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 MIR3160-1-201ENST00000577972 85 ntBASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 HMGN2P15-201ENST00000585707 270 ntBASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB11Q9Y5F2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 AC021146.4-201ENST00000309229 279 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 RNA5SP388-201ENST00000362584 119 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 RNU1-20P-201ENST00000363314 162 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 RNA5SP167-201ENST00000365461 116 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 Y_RNA.542-201ENST00000384641 111 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 Y_RNA.572-201ENST00000384757 98 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 MIR526A2-201ENST00000390198 65 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 RNA5SP504-201ENST00000410676 117 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 AC009237.10-201ENST00000414112 510 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 PTGES3P4-201ENST00000426243 356 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 TOMM22P2-201ENST00000430735 237 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 AL353748.1-201ENST00000440753 474 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 AC004386.2-201ENST00000441858 148 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 RPL23AP70-201ENST00000483361 460 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 AC006445.2-201ENST00000510061 472 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 SNORA31.9-201ENST00000516429 84 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 EIF4A1P12-201ENST00000551910 141 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 AL391813.1-201ENST00000603098 260 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 RNU6-91P-201ENST00000607774 107 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 AL391903.3-201ENST00000612158 163 ntBASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PCDHB11Q9Y5F2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 Y_RNA.24-201ENST00000362508 103 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 SNORA70C-201ENST00000384538 135 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 RNU6-748P-201ENST00000384648 107 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 RNA5SP372-201ENST00000390836 115 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 CRYBB2P1-203ENST00000415709 538 ntBASIC4.41□□□□□ -1.7
PCDHB11Q9Y5F2 AL356387.2-201ENST00000422272 243 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms