Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CD24P4-201ENST00000382840 243 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 Y_RNA.476-201ENST00000384347 108 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 RNU6-1222P-201ENST00000384615 107 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 MIR521-1-201ENST00000384902 87 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 U3.26-201ENST00000391236 204 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 UBA52P6-201ENST00000399822 382 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 RNU2-33P-201ENST00000410344 192 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 SNORD56-201ENST00000413522 71 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 NUP35P1-201ENST00000422734 947 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 PIGFP3-201ENST00000441918 722 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 NDUFB1P2-201ENST00000449477 176 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 CECR9-201ENST00000453421 199 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 AC092798.1-201ENST00000458542 409 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 Y_RNA.687-201ENST00000516558 91 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 RNU7-4P-201ENST00000516961 62 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 AC025755.1-201ENST00000521306 278 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 AC131281.1-201ENST00000522984 164 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 AC009314.1-201ENST00000603871 304 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 AC016727.2-201ENST00000603988 621 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 Z98751.3-201ENST00000604447 521 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 AC004832.5-201ENST00000608677 401 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 AC090132.2-201ENST00000615881 347 ntBASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.72□□□□□ -1.81
CTDP1Q9Y5B0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 RNU6-827P-201ENST00000365553 106 ntBASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 RNU6-741P-201ENST00000383889 107 ntBASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 MIR10A-201ENST00000385043 110 ntBASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 AL591034.2-201ENST00000402839 359 ntBASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 AC022018.1-201ENST00000430685 241 ntBASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 AL627311.1-201ENST00000431514 115 ntBASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 U8.21-201ENST00000459536 136 ntBASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 RPS26P21-201ENST00000475397 348 ntBASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 KC877373.1-201ENST00000479066 408 ntBASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 RNA5SP380-201ENST00000517190 98 ntBASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 TGIF1P1-201ENST00000558095 802 ntBASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 MIR3609-201ENST00000582661 80 ntBASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 AL021879.1-201ENST00000611756 288 ntBASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 AC004852.3-201ENST00000614131 326 ntBASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 AC099506.2-201ENST00000623074 221 ntBASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CTDP1Q9Y5B0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 ZNF72P-201ENST00000425869 1908 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 Y_RNA.106-201ENST00000363189 100 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 Y_RNA.111-201ENST00000363248 100 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 Y_RNA.210-201ENST00000364161 110 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 RNU4-42P-201ENST00000364738 142 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 MIR625-201ENST00000385047 85 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 MIR1252-201ENST00000408861 65 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 COTL1P1-201ENST00000422309 375 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 AC002075.2-201ENST00000425207 252 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 AC007560.1-201ENST00000426912 237 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 AC092573.2-201ENST00000434546 243 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 CHEK2P4-201ENST00000450340 246 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 RPL23AP45-201ENST00000476406 468 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 SNORA40.14-201ENST00000516543 86 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 RN7SKP272-201ENST00000516988 232 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 AP000889.1-201ENST00000530968 660 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 MIR4425-201ENST00000580572 84 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 MIR5188-201ENST00000583467 113 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 AC008121.1-201ENST00000603244 268 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 AL645944.1-201ENST00000603857 493 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 U2.1-201ENST00000618978 145 ntBASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CTDP1Q9Y5B0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 RNY3P11-201ENST00000364153 102 ntBASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 RNU1-140P-201ENST00000365040 165 ntBASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 Y_RNA.512-201ENST00000384518 102 ntBASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 Y_RNA.533-201ENST00000384596 114 ntBASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 MIR34A-201ENST00000385130 110 ntBASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 OSTCP8-201ENST00000445117 448 ntBASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 AC006539.3-201ENST00000454258 129 ntBASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 AC139453.3-201ENST00000493276 369 ntBASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 RPL30P5-201ENST00000494923 336 ntBASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 SNORA31.19-201ENST00000517079 126 ntBASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 Y_RNA.715-201ENST00000517082 110 ntBASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 RNA5SP165-201ENST00000517142 115 ntBASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 AC040926.1-201ENST00000530195 238 ntBASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 AC006600.1-201ENST00000572529 153 ntBASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 AL158827.2-201ENST00000602494 330 ntBASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 HSPE1P7-201ENST00000604681 321 ntBASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 AC107294.3-201ENST00000609211 526 ntBASIC3.69□□□□□ -1.82
CTDP1Q9Y5B0 HMGB1P24-202ENST00000615653 685 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms