Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 RNU6-348P-201ENST00000384386 107 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 SNORD116-20-201ENST00000384529 92 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 RNU6-174P-201ENST00000410406 106 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 Y_RNA.623-201ENST00000411128 95 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.46□□□□□ -2.18
SHANK1Q9Y566 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.46□□□□□ -2.18
SHANK1Q9Y566 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.46□□□□□ -2.18
SHANK1Q9Y566 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.46□□□□□ -2.18
SHANK1Q9Y566 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.46□□□□□ -2.18
SHANK1Q9Y566 AL360271.2-201ENST00000447710 161 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.46□□□□□ -2.18
SHANK1Q9Y566 RNU6-956P-201ENST00000458868 103 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.46□□□□□ -2.18
SHANK1Q9Y566 MRPL42P6-201ENST00000486397 371 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 AC139453.3-201ENST00000493276 369 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.46□□□□□ -2.18
SHANK1Q9Y566 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 AC113155.1-201ENST00000511141 769 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.46□□□□□ -2.18
SHANK1Q9Y566 RNU6-1183P-201ENST00000517054 60 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.46□□□□□ -2.18
SHANK1Q9Y566 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.46□□□□□ -2.18
SHANK1Q9Y566 AC023824.2-201ENST00000566185 400 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.46□□□□□ -2.18
SHANK1Q9Y566 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.46□□□□□ -2.18
SHANK1Q9Y566 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.46□□□□□ -2.18
SHANK1Q9Y566 AC078795.2-201ENST00000602835 1252 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 AL391813.1-201ENST00000603098 260 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 AC091805.2-201ENST00000603848 235 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.46□□□□□ -2.18
SHANK1Q9Y566 U6.42-201ENST00000618440 107 ntBASIC1.46□□□□□ -2.18
SHANK1Q9Y566 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.46□□□□□ -2.18
SHANK1Q9Y566 Y_RNA.324-201ENST00000365165 102 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 Y_RNA.517-201ENST00000384551 106 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 RNU6-297P-201ENST00000384636 107 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
SHANK1Q9Y566 DEFB108C-201ENST00000400154 252 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AL353621.1-201ENST00000418219 243 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 IFNA20P-201ENST00000436840 528 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 OSTCP8-201ENST00000445117 448 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 SNRPFP3-201ENST00000457792 225 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AL163973.1-201ENST00000484753 577 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 ATP5EP1-201ENST00000510257 156 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 RNA5SP102-201ENST00000516865 106 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AP006587.4-201ENST00000526053 529 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AP003034.1-201ENST00000534621 422 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AL138976.2-201ENST00000563989 694 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 MIR5692A1-201ENST00000580523 69 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 DISC2.1-201ENST00000612827 205 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AL596028.1-201ENST00000326971 197 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 RNU6-179P-201ENST00000363350 107 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 RNU1-42P-201ENST00000364033 160 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 RNU6-461P-201ENST00000364195 107 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 SNORA62.1-201ENST00000364287 154 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 SNORA4.3-201ENST00000365564 137 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 RNU6-1025P-201ENST00000410629 104 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.45□□□□□ -2.18
SHANK1Q9Y566 USP9YP18-201ENST00000425912 695 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AC117503.1-201ENST00000472241 394 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AL121594.1-201ENST00000475906 575 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 RPL39P36-201ENST00000490784 156 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.45□□□□□ -2.18
SHANK1Q9Y566 RNU6-1220P-201ENST00000517126 108 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 MTND4P7-201ENST00000523876 130 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AC022880.1-201ENST00000534017 973 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.45□□□□□ -2.18
SHANK1Q9Y566 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AC136619.2-201ENST00000563361 631 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AC015720.1-201ENST00000565251 277 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AC005498.1-201ENST00000592125 465 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AC093783.1-201ENST00000612976 329 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AL359740.1-201ENST00000624340 592 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 AL157786.1-207ENST00000627771 695 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.45□□□□□ -2.18
SHANK1Q9Y566 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SHANK1Q9Y566 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
SHANK1Q9Y566 CENPCP1-201ENST00000533085 2578 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 AL354685.2-201ENST00000448218 1447 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 RNU4-40P-201ENST00000364351 143 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 RNU6-169P-201ENST00000365336 107 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 MIR301A-201ENST00000385261 86 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 U6atac.2-201ENST00000408644 118 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.44□□□□□ -2.18
SHANK1Q9Y566 OR51A5P-201ENST00000415429 942 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 RPL21P90-201ENST00000415692 466 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 BX295541.1-201ENST00000417774 250 ntBASIC1.44□□□□□ -2.18
SHANK1Q9Y566 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.44□□□□□ -2.18
SHANK1Q9Y566 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.44□□□□□ -2.18
SHANK1Q9Y566 AC002486.1-201ENST00000435098 391 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms