Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 MIR150-201ENST00000385048 84 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 RPL17P50-201ENST00000396131 546 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.39□□□□□ -2.19
LRRC42Q9Y546 MTND3P17-201ENST00000416968 344 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 MTND2P9-201ENST00000422293 931 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.39□□□□□ -2.19
LRRC42Q9Y546 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.39□□□□□ -2.19
LRRC42Q9Y546 ISCA1P6-201ENST00000427740 390 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 RPS15AP10-201ENST00000432472 382 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 AC015922.2-201ENST00000435593 184 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 MTND2P4-201ENST00000445034 1004 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.39□□□□□ -2.19
LRRC42Q9Y546 GAPDHP17-201ENST00000449858 1001 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 FDX1P2-201ENST00000450769 375 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 AL162395.1-201ENST00000457882 422 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.39□□□□□ -2.19
LRRC42Q9Y546 RPL30P1-201ENST00000488676 339 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 PTP4A1P4-201ENST00000512479 322 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.39□□□□□ -2.19
LRRC42Q9Y546 SNORD27.1-201ENST00000516319 72 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 AC109446.2-201ENST00000567872 497 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.39□□□□□ -2.19
LRRC42Q9Y546 AC098848.2-201ENST00000588023 330 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 AC084768.2-201ENST00000622736 221 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 Z69720.2-201ENST00000624755 279 ntBASIC1.39□□□□□ -2.19
LRRC42Q9Y546 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
LRRC42Q9Y546 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
LRRC42Q9Y546 SNORA62.1-201ENST00000364287 154 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 RNU6-1164P-201ENST00000364428 107 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 RNU6-45P-201ENST00000384471 107 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 AL365203.2-201ENST00000423444 196 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.38□□□□□ -2.19
LRRC42Q9Y546 AL669831.1-202ENST00000428504 417 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 HMGN2P3-201ENST00000433603 273 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 GPR143P-201ENST00000434155 205 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 HMGN2P5-201ENST00000436882 273 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 GTF2IP13-201ENST00000438487 386 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.38□□□□□ -2.19
LRRC42Q9Y546 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.38□□□□□ -2.19
LRRC42Q9Y546 AC079781.2-201ENST00000446424 169 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 RPL39P29-201ENST00000447779 157 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
LRRC42Q9Y546 AL122001.1-201ENST00000457027 370 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 AMD1P1-201ENST00000457220 922 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.38□□□□□ -2.19
LRRC42Q9Y546 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.38□□□□□ -2.19
LRRC42Q9Y546 Y_RNA.675-201ENST00000516389 149 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.38□□□□□ -2.19
LRRC42Q9Y546 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.38□□□□□ -2.19
LRRC42Q9Y546 AC008269.2-201ENST00000561915 1105 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 MIR3915-201ENST00000578518 97 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 MIR3682-201ENST00000581338 84 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.38□□□□□ -2.19
LRRC42Q9Y546 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 AC097372.5-201ENST00000623665 376 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 U4.7-201ENST00000638126 106 ntBASIC1.38□□□□□ -2.19
LRRC42Q9Y546 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
LRRC42Q9Y546 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.37□□□□□ -2.19
LRRC42Q9Y546 RNU6-715P-201ENST00000365204 103 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 RNU5A-2P-201ENST00000384337 116 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 RNU6-297P-201ENST00000384636 107 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 MIR597-201ENST00000384968 97 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 MIR758-201ENST00000390227 88 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 SNORA40.3-201ENST00000390964 122 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 SRIP3-201ENST00000413200 219 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.37□□□□□ -2.19
LRRC42Q9Y546 RPL31P35-201ENST00000431058 377 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 AL133217.1-201ENST00000450980 425 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 ART2BP-201ENST00000453501 499 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 AC114801.2-201ENST00000503825 781 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 AC021146.2-201ENST00000504736 556 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 AC098862.1-201ENST00000504991 413 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.37□□□□□ -2.19
LRRC42Q9Y546 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.37□□□□□ -2.19
LRRC42Q9Y546 AC074344.1-201ENST00000512823 224 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 RNU6-250P-201ENST00000516958 103 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 AC060788.1-201ENST00000521318 469 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.37□□□□□ -2.19
LRRC42Q9Y546 MTATP6P24-201ENST00000576835 677 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.37□□□□□ -2.19
LRRC42Q9Y546 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.37□□□□□ -2.19
LRRC42Q9Y546 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.37□□□□□ -2.19
LRRC42Q9Y546 PRR13P7-201ENST00000605538 430 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.37□□□□□ -2.19
LRRC42Q9Y546 AP001506.1-201ENST00000615444 211 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 AC023510.2-201ENST00000622162 746 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 AC007494.3-201ENST00000624660 743 ntBASIC1.37□□□□□ -2.19
LRRC42Q9Y546 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.37□□□□□ -2.19
LRRC42Q9Y546 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.37□□□□□ -2.19
LRRC42Q9Y546 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.37□□□□□ -2.19
LRRC42Q9Y546 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.37□□□□□ -2.19
LRRC42Q9Y546 RNU6-105P-201ENST00000363909 104 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 RNU6-743P-201ENST00000364151 106 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 RNU6-1303P-201ENST00000364841 107 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 RNU6-108P-201ENST00000365558 107 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 MIR454-201ENST00000390180 115 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 Y_RNA.597-201ENST00000410463 100 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 RN7SKP284-201ENST00000411002 343 ntBASIC1.36□□□□□ -2.19
LRRC42Q9Y546 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms