Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 Y_RNA.112-201ENST00000363250 102 ntBASIC3.03□□□□□ -1.92
VPS4AQ9UN37 RNU6-799P-201ENST00000363567 107 ntBASIC3.03□□□□□ -1.92
VPS4AQ9UN37 Y_RNA.326-201ENST00000365176 113 ntBASIC3.03□□□□□ -1.92
VPS4AQ9UN37 SNORA41-201ENST00000384675 132 ntBASIC3.03□□□□□ -1.92
VPS4AQ9UN37 RPL21P3-201ENST00000395517 478 ntBASIC3.03□□□□□ -1.92
VPS4AQ9UN37 AL513475.1-201ENST00000406602 315 ntBASIC3.03□□□□□ -1.92
VPS4AQ9UN37 FTH1P15-201ENST00000406984 280 ntBASIC3.03□□□□□ -1.92
VPS4AQ9UN37 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.03□□□□□ -1.92
VPS4AQ9UN37 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS4AQ9UN37 AC107083.1-201ENST00000439643 279 ntBASIC3.03□□□□□ -1.92
VPS4AQ9UN37 AL137792.2-201ENST00000443484 235 ntBASIC3.03□□□□□ -1.92
VPS4AQ9UN37 MRPL42P6-201ENST00000486397 371 ntBASIC3.03□□□□□ -1.92
VPS4AQ9UN37 RNA5SP384-201ENST00000516615 116 ntBASIC3.03□□□□□ -1.92
VPS4AQ9UN37 SNORD19.2-201ENST00000516978 73 ntBASIC3.03□□□□□ -1.92
VPS4AQ9UN37 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS4AQ9UN37 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS4AQ9UN37 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.03□□□□□ -1.92
VPS4AQ9UN37 AC018889.1-201ENST00000605372 397 ntBASIC3.03□□□□□ -1.92
VPS4AQ9UN37 MIR8076-201ENST00000611401 83 ntBASIC3.03□□□□□ -1.92
VPS4AQ9UN37 PISRT1.1-201ENST00000616930 107 ntBASIC3.03□□□□□ -1.92
VPS4AQ9UN37 uc_338.22-201ENST00000622722 187 ntBASIC3.03□□□□□ -1.92
VPS4AQ9UN37 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
VPS4AQ9UN37 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS4AQ9UN37 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VPS4AQ9UN37 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS4AQ9UN37 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS4AQ9UN37 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS4AQ9UN37 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VPS4AQ9UN37 MIR369-201ENST00000362155 70 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 RNU6-1115P-201ENST00000362490 106 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 RNU6-1040P-201ENST00000383974 107 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 SNORA44-201ENST00000384584 132 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 AL139281.1-201ENST00000422120 335 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 Z82205.1-201ENST00000428456 297 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS4AQ9UN37 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.02□□□□□ -1.93
VPS4AQ9UN37 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS4AQ9UN37 RPL21P2-201ENST00000440049 481 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 NIPA2P5-201ENST00000452282 464 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 RPL30P15-201ENST00000457129 321 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS4AQ9UN37 AC008571.1-201ENST00000467232 300 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
VPS4AQ9UN37 AK3P2-201ENST00000507976 429 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 SNORA31.21-201ENST00000517180 77 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 AC022634.1-201ENST00000520765 532 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 AP005902.1-201ENST00000521358 186 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS4AQ9UN37 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS4AQ9UN37 AC022432.1-201ENST00000595739 310 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS4AQ9UN37 AC013412.1-201ENST00000610687 192 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 AC011890.2-201ENST00000613393 294 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 AC004852.3-201ENST00000614131 326 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 AC133104.2-201ENST00000615272 193 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
VPS4AQ9UN37 HAUS6P2-201ENST00000433254 2404 ntBASIC3.02□□□□□ -1.93
VPS4AQ9UN37 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
VPS4AQ9UN37 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS4AQ9UN37 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS4AQ9UN37 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS4AQ9UN37 RNU6-1280P-201ENST00000365211 107 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 RNU6-1027P-201ENST00000383998 107 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 RNU6-890P-201ENST00000384121 107 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 MIR559-201ENST00000385188 96 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 AL591034.2-201ENST00000402839 359 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 MIR548P-201ENST00000408336 84 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 AP000275.1-201ENST00000411943 390 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS4AQ9UN37 AC074117.2-201ENST00000417130 397 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS4AQ9UN37 AC243428.1-201ENST00000421099 264 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS4AQ9UN37 AC018865.2-201ENST00000423631 129 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 RPS15AP5-201ENST00000436276 388 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 AC007969.2-201ENST00000441891 191 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS4AQ9UN37 U8.21-201ENST00000459536 136 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 Y_RNA.631-201ENST00000459607 101 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS4AQ9UN37 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS4AQ9UN37 RNU6-581P-201ENST00000516214 105 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 RNU6-612P-201ENST00000516909 102 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 SNORA31.18-201ENST00000517043 134 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 ELOCP31-201ENST00000540463 467 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 MIR5696-201ENST00000578474 85 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 MIR4672-201ENST00000583126 81 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 AC005899.2-201ENST00000584353 90 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 MIR3976-201ENST00000606807 139 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 uc_338.25-201ENST00000613756 156 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS4AQ9UN37 AC091925.1-201ENST00000623204 462 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.01□□□□□ -1.93
VPS4AQ9UN37 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
VPS4AQ9UN37 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3□□□□□ -1.93
VPS4AQ9UN37 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3□□□□□ -1.93
VPS4AQ9UN37 MTND5P30-201ENST00000452896 1731 ntBASIC3□□□□□ -1.93
VPS4AQ9UN37 Y_RNA.5-201ENST00000362334 102 ntBASIC3□□□□□ -1.93
VPS4AQ9UN37 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 213.1 ms