Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 AL034351.1-201ENST00000605288 668 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 AC011921.3-201ENST00000605540 361 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 SNHG22-203ENST00000617833 660 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 ZNF299P-201ENST00000406845 1804 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 USP8P1-201ENST00000494673 3183 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 RNU6-715P-201ENST00000365204 103 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 U8.8-201ENST00000365399 135 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 AC092573.2-201ENST00000434546 243 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 RPS4XP22-201ENST00000480755 780 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 AC087190.1-201ENST00000484462 480 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 AC107032.1-201ENST00000485945 480 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 RNU6-479P-201ENST00000516348 105 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 AC091144.1-201ENST00000519573 138 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 DEFB108E-201ENST00000524692 240 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 TRAV32-201ENST00000553993 340 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 LINC00901.1-201ENST00000617252 152 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 IGHVIII-44-202ENST00000636235 289 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 U6.106-201ENST00000636360 105 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 RNU6-1329P-201ENST00000365664 107 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 RNU6-790P-201ENST00000384479 105 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 Y_RNA.626-201ENST00000411288 95 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 AC069218.2-201ENST00000411665 344 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 UBE2V1P4-201ENST00000425374 344 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 BX679664.1-201ENST00000434429 253 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 snoU13.7-201ENST00000459220 104 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 AC087879.1-201ENST00000474343 374 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 RPL21P103-201ENST00000479921 488 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 RPS4XP13-201ENST00000483219 789 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 APOOP4-201ENST00000513530 597 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 AC005951.2-201ENST00000576282 495 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 MIR4425-201ENST00000580572 84 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 MIR4300-201ENST00000581016 96 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 RNU6-85P-201ENST00000605989 107 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 LINC02555-201ENST00000563933 1951 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 RNU6-47P-201ENST00000383866 107 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 SNORD67-201ENST00000390833 111 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 RPS4XP7-201ENST00000406274 780 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 RNU4-65P-201ENST00000410473 140 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 Y_RNA.602-201ENST00000410535 92 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 AC074133.1-201ENST00000515696 183 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 RNA5SP24-201ENST00000516478 95 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 RN7SKP258-201ENST00000517151 304 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 AC012443.1-201ENST00000605605 231 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 AC006329.2-201ENST00000611491 394 ntBASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.35□□□□□ -2.03
NOTCH3Q9UM47 AC090971.4-201ENST00000560291 1800 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 Y_RNA.48-201ENST00000362710 103 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 RNU4-90P-201ENST00000362773 141 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 RNU1-76P-201ENST00000362903 159 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 U3.13-201ENST00000364804 214 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 RNU6-81P-201ENST00000365608 104 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 Y_RNA.504-201ENST00000384481 104 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 AL139156.1-201ENST00000412785 841 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 AC006989.1-201ENST00000427212 131 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 AL445305.1-201ENST00000432577 575 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 NDUFB4P10-201ENST00000452541 359 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 AC010401.1-201ENST00000463867 348 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 AC114982.1-201ENST00000469402 321 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 AC018437.1-201ENST00000492214 406 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 AL359273.1-201ENST00000510918 627 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 AC027288.2-201ENST00000553028 243 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 AL162424.1-201ENST00000602325 221 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 MIR7843-201ENST00000622274 79 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 U6.92-201ENST00000636464 89 ntBASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.34□□□□□ -2.03
NOTCH3Q9UM47 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms