Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 MED28P2-201ENST00000475771 317 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 AC139453.3-201ENST00000493276 369 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 AC023141.12-201ENST00000512399 199 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 SNORA31.6-201ENST00000516241 130 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 AC025755.1-201ENST00000521306 278 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 AC023824.2-201ENST00000566185 400 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 FAM60BP-201ENST00000578364 658 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 AC008121.1-201ENST00000603244 268 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 SRGNP1-201ENST00000603392 451 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 AC069200.1-201ENST00000609511 323 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 AP003355.3-201ENST00000623465 114 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 AC127459.3-201ENST00000624328 466 ntBASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.28□□□□□ -1.88
PACSIN3Q9UKS6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 MIR412-201ENST00000362142 91 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 SNORA31-201ENST00000362607 130 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 U3.13-201ENST00000364804 214 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 MIR218-2-201ENST00000385006 110 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 MIR10A-201ENST00000385043 110 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 AL079342.1-201ENST00000401460 267 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 Y_RNA.623-201ENST00000411128 95 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 TMEM167AP1-201ENST00000423409 219 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 RPL23AP67-201ENST00000465341 474 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 RPL31P13-201ENST00000484151 370 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 AC107393.1-201ENST00000512403 346 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 RNU1-143P-201ENST00000516296 146 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 SCARNA20.6-201ENST00000517251 106 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 AC068657.1-201ENST00000520807 306 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 AC010620.2-201ENST00000600135 313 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 BX284668.6-201ENST00000606899 438 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 U1.23-201ENST00000610293 146 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 RNU1-68P-201ENST00000615382 146 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 AC011476.5-201ENST00000615594 130 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 U1.39-201ENST00000621562 146 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 LINC02555-201ENST00000563933 1951 ntBASIC3.27□□□□□ -1.89
PACSIN3Q9UKS6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 Y_RNA.123-201ENST00000363338 102 ntBASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 RNA5SP197-201ENST00000363357 119 ntBASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 RNU6-937P-201ENST00000384325 106 ntBASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 RNU6-102P-201ENST00000384485 104 ntBASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 RPS29P13-201ENST00000402041 169 ntBASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 Z82188.1-201ENST00000436709 154 ntBASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 AL138752.1-201ENST00000452964 351 ntBASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 PRSS3P4-201ENST00000453323 162 ntBASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 FABP5P15-201ENST00000453566 214 ntBASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 AC010285.1-201ENST00000470580 392 ntBASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 AP002770.2-201ENST00000543613 532 ntBASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 AP000787.2-201ENST00000604432 568 ntBASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 AC073657.2-201ENST00000605661 303 ntBASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 ZNF826P-207ENST00000622273 1910 ntBASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PACSIN3Q9UKS6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 RNU6-545P-201ENST00000362681 104 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 Y_RNA.76-201ENST00000362931 109 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 RNA5SP383-201ENST00000362934 120 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 Y_RNA.83-201ENST00000363005 113 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 RNA5SP189-201ENST00000364920 115 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 SNORA70.4-201ENST00000365509 134 ntBASIC3.25□□□□□ -1.89
PACSIN3Q9UKS6 RNU6-1181P-201ENST00000384191 106 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms