Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC090616.2-202ENST00000584248 222 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 MIR548AC-201ENST00000585049 88 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 AC093648.1-201ENST00000623546 606 ntBASIC1.81□□□□□ -2.12
CTNNA3Q9UI47 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 RNU1-58P-201ENST00000362413 163 ntBASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 MIR1304-201ENST00000408243 91 ntBASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 RNU2-39P-201ENST00000410604 198 ntBASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 MTND4P20-201ENST00000424125 869 ntBASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 AL513185.2-201ENST00000425543 193 ntBASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 USP9YP12-201ENST00000450481 570 ntBASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 RNU1-98P-201ENST00000458992 160 ntBASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 AC117522.1-201ENST00000509821 380 ntBASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 FABP5P5-201ENST00000515537 406 ntBASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 SNORA4-201ENST00000584302 138 ntBASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 AC091304.9-201ENST00000612091 226 ntBASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 AL132822.1-201ENST00000617063 513 ntBASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 AC138649.3-201ENST00000622154 254 ntBASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 MTND4P4-201ENST00000439033 1366 ntBASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 FARSBP1-201ENST00000435808 1778 ntBASIC1.8□□□□□ -2.12
CTNNA3Q9UI47 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 RNU6-212P-201ENST00000362642 104 ntBASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 RNU6-371P-201ENST00000364283 108 ntBASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 RNU6-60P-201ENST00000364792 103 ntBASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 RPS3AP36-201ENST00000398190 775 ntBASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 MTCYBP36-201ENST00000404146 440 ntBASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 AC009310.1-201ENST00000414414 451 ntBASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 snoU109.2-201ENST00000459316 135 ntBASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 RNU6-965P-201ENST00000516721 96 ntBASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 RNU6-685P-201ENST00000517088 95 ntBASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 RN7SKP256-201ENST00000517201 314 ntBASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 RPL21P5-201ENST00000554662 472 ntBASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 HMGN1P30-201ENST00000589286 268 ntBASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 AL022161.1-201ENST00000604390 213 ntBASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 AC016925.2-201ENST00000605108 242 ntBASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 AC027807.2-201ENST00000616099 408 ntBASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CTNNA3Q9UI47 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 OR4G2P-201ENST00000328113 903 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 Y_RNA.22-201ENST00000362492 102 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 RNU6-39P-201ENST00000384344 107 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 MIR29B2-201ENST00000385055 81 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 MIR30A-201ENST00000385092 71 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 MIR1323-201ENST00000408090 73 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 Y_RNA.598-201ENST00000410480 95 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 AL356583.2-201ENST00000426536 280 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 CALM2P2-201ENST00000428512 440 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 AL365400.1-201ENST00000431854 640 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 HMGB1P31-201ENST00000437242 427 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 AP001025.1-201ENST00000486139 332 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 AC096745.1-201ENST00000509945 370 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 Y_RNA.675-201ENST00000516389 149 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 SNORA31.24-201ENST00000517232 57 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 RMST_4.1-201ENST00000616886 107 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 AC079248.2-201ENST00000623779 326 ntBASIC1.78□□□□□ -2.12
CTNNA3Q9UI47 SNORA7.1-201ENST00000363750 139 ntBASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 RNU6-743P-201ENST00000364151 106 ntBASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 SNORA24.1-201ENST00000384401 135 ntBASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 SNORD116-20-201ENST00000384529 92 ntBASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 CISD1P1-201ENST00000393907 327 ntBASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 CBX3P9-201ENST00000402326 552 ntBASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 RNU2-23P-201ENST00000410545 195 ntBASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 AC114491.1-201ENST00000416095 246 ntBASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 ELOCP4-201ENST00000420090 333 ntBASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 USP9YP18-201ENST00000425912 695 ntBASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 AF131216.2-201ENST00000512316 564 ntBASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 RNU6-415P-201ENST00000516252 97 ntBASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 AC106038.2-201ENST00000520706 568 ntBASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 AC022616.3-201ENST00000523940 148 ntBASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 AC008521.1-201ENST00000587471 187 ntBASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 AC092354.1-201ENST00000606057 376 ntBASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 AC023510.2-201ENST00000622162 746 ntBASIC1.77□□□□□ -2.13
CTNNA3Q9UI47 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms