Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SNORD70.1-201ENST00000391007 85 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 SNORA26.9-201ENST00000391322 122 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 CDK8P2-201ENST00000415020 547 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 AC073464.1-201ENST00000429823 534 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 MTCO2P16-201ENST00000436962 677 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 RPL23AP7-203ENST00000449021 469 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 AL121594.1-201ENST00000475906 575 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 AC108210.2-201ENST00000503681 201 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 RNU1-40P-201ENST00000516816 164 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 RNU1-97P-201ENST00000516872 164 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 AC010620.1-201ENST00000601088 1102 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 SNRPGP19-201ENST00000603826 189 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 AL670379.2-201ENST00000604983 252 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 RN7SKP299-201ENST00000606679 301 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 AC022418.1-201ENST00000624118 445 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 U4.7-201ENST00000638126 106 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.71□□□□□ -2.13
CLCF1Q9UBD9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNA5SP432-201ENST00000362480 116 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-37P-201ENST00000362692 107 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 Y_RNA.159-201ENST00000363674 87 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-11P-201ENST00000364234 107 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-25P-201ENST00000383873 107 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-1-201ENST00000383898 107 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-1103P-201ENST00000384150 107 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-48P-201ENST00000384161 107 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-36P-201ENST00000384172 107 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-4P-201ENST00000384205 107 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-5P-201ENST00000384238 107 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-3P-201ENST00000384314 107 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-517P-201ENST00000384362 110 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-16P-201ENST00000384385 107 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-15P-201ENST00000384534 107 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-1127P-201ENST00000384580 107 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-2-201ENST00000384627 107 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-29P-201ENST00000384637 107 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-9-201ENST00000384776 107 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-33P-201ENST00000384793 107 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 CBX3P9-201ENST00000402326 552 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 AL360221.1-201ENST00000445989 335 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 SNRPFP3-201ENST00000457792 225 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 SCARNA18-201ENST00000459004 134 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU7-63P-201ENST00000459054 62 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-717P-201ENST00000459076 104 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RPS3AP17-201ENST00000472594 777 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU2-69P-201ENST00000516061 100 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RN7SKP219-201ENST00000516825 296 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 AC109479.2-201ENST00000517842 174 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 MIR3941-201ENST00000582572 103 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RSL24D1P11-201ENST00000591045 491 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 AC078795.2-201ENST00000602835 1252 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 RNU6-6P-201ENST00000606623 107 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 AC012640.5-201ENST00000623897 319 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 AC090517.3-201ENST00000625170 141 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 CENPCP1-201ENST00000533085 2578 ntBASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CLCF1Q9UBD9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 RNU6-1303P-201ENST00000364841 107 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 Y_RNA.296-201ENST00000364930 108 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 RNA5SP138-201ENST00000365098 114 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 SNORA25B-201ENST00000365507 128 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 AL591034.2-201ENST00000402839 359 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 SNORD23.1-201ENST00000408212 104 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 RNU6-1245P-201ENST00000411130 106 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 EDDM3CP-201ENST00000415977 425 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 AC002486.1-201ENST00000435098 391 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 AC007969.2-201ENST00000441891 191 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 AC007677.1-201ENST00000445757 515 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 RPL39P29-201ENST00000447779 157 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 RPL30P12-201ENST00000474666 353 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 AC079140.3-201ENST00000511111 550 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 RNU6-377P-201ENST00000515965 102 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 RNU7-193P-201ENST00000516723 65 ntBASIC1.7□□□□□ -2.14
CLCF1Q9UBD9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms