Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC116347.2-201ENST00000514912 523 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.94□□□□□ -2.26
CCDC88CQ9P219 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.94□□□□□ -2.26
CCDC88CQ9P219 CBX3P8-201ENST00000532412 525 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AL139022.2-201ENST00000606934 443 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AL031775.1-201ENST00000607014 887 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AC091965.4-201ENST00000607691 587 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AL078604.3-201ENST00000615580 211 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AC092140.2-201ENST00000618027 521 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 U6.42-201ENST00000618440 107 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AL359740.1-201ENST00000624340 592 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
CCDC88CQ9P219 RNU6-944P-201ENST00000364023 107 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 SNORA25.8-201ENST00000364831 128 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 RNY1P14-201ENST00000384426 108 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 MIR29B2-201ENST00000385055 81 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 MIR30A-201ENST00000385092 71 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AL357139.1-201ENST00000407792 426 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 RNU2-48P-201ENST00000410694 191 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 RPL22P18-201ENST00000417197 377 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AL353621.1-201ENST00000418219 243 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 SNRPEP10-201ENST00000420249 274 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AL591212.2-201ENST00000433923 257 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AC092991.1-201ENST00000477176 376 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 MTND2P14-201ENST00000482139 351 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CCDC88CQ9P219 RNU5A-4P-201ENST00000516588 111 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 RN7SKP49-201ENST00000516675 260 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AC023050.2-201ENST00000544968 387 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.94□□□□□ -2.26
CCDC88CQ9P219 MIR5000-201ENST00000577717 103 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AP001981.2-201ENST00000603241 418 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AC080013.3-201ENST00000606839 578 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 RNU6-1214P-201ENST00000363650 109 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 Y_RNA.255-201ENST00000364581 97 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 RNU6-611P-201ENST00000384276 104 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 RNU6-72P-201ENST00000384285 79 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 MTND1P32-201ENST00000433043 938 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 NDUFB1P2-201ENST00000449477 176 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AC119751.4-201ENST00000507498 357 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 RNU2-53P-201ENST00000516257 147 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 RNU6-965P-201ENST00000516721 96 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AC034114.1-201ENST00000520293 285 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 OR5B19P-201ENST00000531766 928 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AC123904.2-201ENST00000548059 300 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 CYP3A137P-201ENST00000562436 69 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 MIR5697-201ENST00000578045 78 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 MIR3118-1-201ENST00000581787 76 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AC005771.1-201ENST00000585581 349 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AC008751.2-201ENST00000597885 980 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AC103810.8-201ENST00000607347 118 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AL159153.1-201ENST00000619688 317 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AC091895.1-201ENST00000624494 256 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 MIR3529-201ENST00000637713 78 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 snoU2_19.1-201ENST00000362361 80 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 SNORD114-27-201ENST00000363766 70 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 RNU6-487P-201ENST00000365430 104 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 MIR1-2-201ENST00000384961 85 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 RNU6-360P-201ENST00000390944 104 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 BTF3L4P2-201ENST00000392798 346 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 RNA5SP390-201ENST00000410191 113 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 EIF4EP2-201ENST00000422816 654 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 RNU6-914P-201ENST00000516749 109 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AC233702.2-202ENST00000562547 291 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AC091489.2-201ENST00000566263 604 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 MIR151B-201ENST00000584249 96 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.93□□□□□ -2.26
CCDC88CQ9P219 NDUFA8P1-201ENST00000605525 367 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 ZNF680P1-201ENST00000436625 1469 ntBASIC0.93□□□□□ -2.26
CCDC88CQ9P219 ICE2P2-201ENST00000483823 2787 ntBASIC0.92□□□□□ -2.26
CCDC88CQ9P219 AC018630.2-201ENST00000534866 2403 ntBASIC0.92□□□□□ -2.26
CCDC88CQ9P219 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.92□□□□□ -2.26
CCDC88CQ9P219 AC114491.1-201ENST00000416095 246 ntBASIC0.92□□□□□ -2.26
CCDC88CQ9P219 AC016831.2-201ENST00000417179 352 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms