Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 AL714022.1-201ENST00000439897 151 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 RPS26P2-201ENST00000440331 348 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 AC010099.1-201ENST00000455434 375 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 RNA5SP103-201ENST00000459503 118 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 RN7SL293P-201ENST00000481765 281 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 KLKP1-201ENST00000595979 403 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 SNRPGP20-201ENST00000604477 205 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 AL590240.4-201ENST00000616908 390 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 AC068831.7-201ENST00000616954 363 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CXXC1Q9P0U4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 AC099654.7-201ENST00000635788 2127 ntBASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 UBE2WP1-201ENST00000362030 340 ntBASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 SNORA60-201ENST00000362396 134 ntBASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 RNU6-1020P-201ENST00000363684 107 ntBASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 RNY4P28-201ENST00000365281 93 ntBASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.464-201ENST00000384282 110 ntBASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 RNU1-44P-201ENST00000384453 163 ntBASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.498-201ENST00000384460 102 ntBASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 U3.26-201ENST00000391236 204 ntBASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 AL512633.1-201ENST00000399931 655 ntBASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 AL160275.2-201ENST00000412010 394 ntBASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 RPL36AP10-201ENST00000421785 322 ntBASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 MRPS10P1-201ENST00000448483 130 ntBASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 SNORA27.4-201ENST00000516650 95 ntBASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 RNU6-789P-201ENST00000517105 102 ntBASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 AL512605.2-201ENST00000592972 256 ntBASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 RPS15AP11-201ENST00000594193 385 ntBASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.37□□□□□ -1.71
CXXC1Q9P0U4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.82-201ENST00000363000 102 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.92-201ENST00000363043 102 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 RNA5SP197-201ENST00000363357 119 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.235-201ENST00000364412 102 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.306-201ENST00000365015 102 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.312-201ENST00000365089 102 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.322-201ENST00000365151 102 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.446-201ENST00000384178 104 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 RNU2-49P-201ENST00000410666 184 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 RN7SKP167-201ENST00000411047 285 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.650-201ENST00000459002 102 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 RPS26P28-201ENST00000470806 348 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 RNU5F-2P-201ENST00000516066 82 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.777-201ENST00000516982 102 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 AC018448.1-201ENST00000552843 316 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.771-201ENST00000598668 102 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 MZT1P2-201ENST00000604387 248 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 AL034555.1-201ENST00000604816 211 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 AC022441.3-201ENST00000605737 136 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 AC005520.5-201ENST00000613926 164 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 Y_RNA.789-201ENST00000622480 102 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 MIR3651-201ENST00000630427 90 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 SCN1A-220ENST00000641603 12506 ntBASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CXXC1Q9P0U4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CXXC1Q9P0U4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms