Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 CDC27P3-201ENST00000635418 1910 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 RNU6-858P-201ENST00000362436 107 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 RNU6-78P-201ENST00000362897 107 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 RNU6-461P-201ENST00000364195 107 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 RNU5E-4P-201ENST00000364931 120 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 SNORD81.2-201ENST00000365153 76 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 RNU6-1280P-201ENST00000365211 107 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 MIR767-201ENST00000390228 109 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 FTH1P15-201ENST00000406984 280 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 MTND3P8-201ENST00000412909 339 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 AL590632.1-201ENST00000424289 371 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.31□□□□□ -2.04
NDE1Q9NXR1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.31□□□□□ -2.04
NDE1Q9NXR1 AL161651.1-201ENST00000440882 223 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 IFNA11P-201ENST00000446352 526 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.31□□□□□ -2.04
NDE1Q9NXR1 AC103851.1-201ENST00000506833 274 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 AC116655.1-201ENST00000508324 901 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.31□□□□□ -2.04
NDE1Q9NXR1 RPL39P5-202ENST00000512505 151 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 RNU6-875P-201ENST00000516488 106 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 AC069113.1-201ENST00000517763 267 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 AC022080.3-201ENST00000544433 482 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 NACAP3-201ENST00000552100 481 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.31□□□□□ -2.04
NDE1Q9NXR1 AC105137.2-201ENST00000569073 466 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.31□□□□□ -2.04
NDE1Q9NXR1 AC064836.2-201ENST00000609491 462 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.31□□□□□ -2.04
NDE1Q9NXR1 AC004852.3-201ENST00000614131 326 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 Y_RNA.804-201ENST00000615262 101 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 AC104260.1-201ENST00000616660 539 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.31□□□□□ -2.04
NDE1Q9NXR1 AC022306.2-201ENST00000617563 647 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 AC097372.5-201ENST00000623665 376 ntBASIC2.31□□□□□ -2.04
NDE1Q9NXR1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.31□□□□□ -2.04
NDE1Q9NXR1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
NDE1Q9NXR1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.31□□□□□ -2.04
NDE1Q9NXR1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NDE1Q9NXR1 AC008669.1-201ENST00000565823 2178 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NDE1Q9NXR1 RNU6-428P-201ENST00000362942 107 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 RNU6-942P-201ENST00000363002 107 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 SNORA5B-201ENST00000363786 132 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 RNU5E-7P-201ENST00000365290 117 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 RNU6-510P-201ENST00000391239 108 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.3□□□□□ -2.04
NDE1Q9NXR1 SNORD56-201ENST00000413522 71 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 MTCO3P46-201ENST00000425787 232 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 AL445687.1-201ENST00000439946 251 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.3□□□□□ -2.04
NDE1Q9NXR1 AC092436.3-201ENST00000511788 257 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 AC087854.1-201ENST00000519706 414 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 AP000889.2-201ENST00000532684 490 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 UBE2V2P2-201ENST00000587677 504 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 AL355877.2-201ENST00000603670 358 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 ELOCP5-201ENST00000604924 333 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 MIR7106-201ENST00000612419 65 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 ATP5A1P2-202ENST00000616464 443 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 MTND4P12-201ENST00000498999 1377 ntBASIC2.3□□□□□ -2.04
NDE1Q9NXR1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.3□□□□□ -2.04
NDE1Q9NXR1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
NDE1Q9NXR1 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 AL596028.1-201ENST00000326971 197 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 Y_RNA.212-201ENST00000364177 102 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 Y_RNA.301-201ENST00000364990 103 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 RNU6-827P-201ENST00000365553 106 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 MIR27B-201ENST00000385129 97 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 AL133475.1-201ENST00000404414 305 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 AL356432.1-201ENST00000405809 419 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 AL513475.1-201ENST00000406602 315 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 RAP1BP3-201ENST00000407180 549 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.29□□□□□ -2.04
NDE1Q9NXR1 AL359672.1-201ENST00000442302 409 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 RPL32P28-201ENST00000443577 397 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.29□□□□□ -2.04
NDE1Q9NXR1 MTND4P17-201ENST00000470444 350 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 AC096576.1-201ENST00000489014 359 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.29□□□□□ -2.04
NDE1Q9NXR1 Y_RNA.682-201ENST00000516457 100 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 ACA59.2-201ENST00000517061 156 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.29□□□□□ -2.04
NDE1Q9NXR1 AP004607.1-201ENST00000524456 203 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 COPS8P3-201ENST00000526024 482 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.29□□□□□ -2.04
NDE1Q9NXR1 AC103996.1-201ENST00000555468 102 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 AC091135.1-201ENST00000585943 307 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.29□□□□□ -2.04
NDE1Q9NXR1 AL138726.1-201ENST00000614873 333 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 RMST_7.1-201ENST00000621935 268 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 AC010889.1-201ENST00000566193 2666 ntBASIC2.29□□□□□ -2.04
NDE1Q9NXR1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
NDE1Q9NXR1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
NDE1Q9NXR1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
NDE1Q9NXR1 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms